KEGG   Agrilus planipennis (emerald ash borer): 108735985
Entry
108735985         CDS       T07419                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
apln  Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:apln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:apln04121]
    108735985
Enzymes [BR:apln01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108735985
Ubiquitin system [BR:apln04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108735985
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 PA zf-C3HC4 zf-C3HC4_2 zf-rbx1 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf_RING_Vps8 MpPF26 Prok-RING_4 Hemotin zf-ANAPC11 zf_RING_Vps8_fungal PHD zf-C3H2C3 LapA_dom FeoB_associated RINGv zf-RING-like zf-RING_4 zf-RING_Vps41 Cadherin_C_2 PHDvar_NSD
Other DBs
NCBI-GeneID: 108735985
NCBI-ProteinID: XP_018323733
UniProt: A0A1W4WUB3
LinkDB
Position
Unknown
AA seq 397 aa
MAWVKWAGLYVILMQLHHIGADILVLPMDGRQIEEEFRDLPSTFGNSLPYEVGLRGLVVY
SDPPEACTVVSKPPMVANYTGKWILLVARFNCSFEDKVRRAQDAWYDGVIVHNVGSDILE
SMTAKNPNGIHIPSVFVGETTGSMIKELYTYNKDYFIIINSELPFNINTHLLLPFAIVVG
ICFIVMVIFMIVKFIKDRRRQRRHRLSSSALNKIPVCKFAKGDPYDTCAICLDDYVEGEK
LRILPCAHAYHTKCIDPWLTKNRRVCPVCKRKVFAHDETPHGESDSDSDADDTTPLVRNN
NGNVTQGGTFVQQAENPFQRAARSISQQVDGVNFVTASDHHSINGEADHTDSTSTTSTSS
SYQSLWPDANGRLVPVHHISGNSNSNSNPAERRNEVV
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggcttgggtaaaatgggcaggcctgtatgtcatattgatgcagttacatcacatagga
gcagatatccttgttctgccaatggatggaagacaaatagaagaagaatttagagatctt
ccttcaacttttgggaattcgttgccatatgaagtaggcctaagaggtcttgtggtatat
tctgatccaccagaagcatgtactgttgtttcaaagcctccaatggtggcaaattacaca
ggaaagtggatattattggtagcacgctttaattgttcatttgaagataaagttcgtagg
gcacaagatgcttggtatgatggggttatagtacataatgtaggctcagatattttagag
tctatgacagccaaaaatcctaatggaatacacatcccttcagtttttgttggtgaaacg
acaggaagtatgataaaagagttgtatacatacaataaagattattttataataataaat
tcagaactaccatttaacattaacacccatttgctgttaccatttgcaattgtggttgga
atatgtttcatagtgatggttatttttatgattgtgaagtttataaaagatcgaaggagg
caacgtagacatagactctcatcttcagccttaaacaaaattccagtctgtaaatttgct
aagggagatccttatgatacatgtgccatatgtttagatgattatgttgagggtgaaaaa
cttcgaatacttccatgtgcccatgcttaccatacaaaatgtatcgacccctggttgaca
aaaaatcgtcgagtttgtccagtttgtaagcgaaaggtgttcgcgcatgacgagacacct
catggggagtctgacagtgattcagatgctgatgatacgacccctttagtgaggaataac
aacggtaacgtaacgcagggtggaacttttgttcagcaagcagagaatccgttccaacga
gctgcgcgttctatttcccaacaggtggatggcgttaatttcgttaccgcttctgatcat
cacagtatcaacggtgaagccgaccataccgatagcacgtcgactacatcgactagcagt
tcgtatcaaagtctttggccagatgctaatggtcgattagttccagttcaccatatctca
ggcaattccaacagcaattccaaccctgcggaacgtcgtaacgaagtcgtttag

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