Agrilus planipennis (emerald ash borer): 108736006
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Entry
108736006 CDS
T07419
Name
(RefSeq) regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03013
Nucleocytoplasmic transport
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108736006
03015 mRNA surveillance pathway
108736006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108736006
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108736006
mRNA cycle factors
P-body specific factors
108736006
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
108736006
NCBI-ProteinID:
XP_018323755
UniProt:
A0A1W4WUN6
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MSDNITFGNSLQKNFNKMKEKKVRPLTKVVIRRLPPDIDKGTFMEQISPVPNFDYFYLIK
ADSLLGEFAFSRAYINFINVEDIFIFKEKFDSYVFIDQKGHEYAAVVEFAAFQKIPKKRR
ARPDPKCATIESDPYYKEFLLSLSEQPKPEEKPEYSYQFSSENKEDLMTTPLLEYVKQKK
VDKQRIREERRDERRKREIERKKFKEDEKKKYLEEKYKPGAKSYSSRGSKSFVYGHKTNE
PEIVEEEETHLRKGESNTDDPKLFYKNNRRNFNHDKVKPNGHYESKDFKYRKEDYKDYSR
ERNFGNVKKMSKYETKQNVDSEKNYPKKVKKYSAIKEERRNEIKKHVQKKSELKHDDIKN
TNEEIEQEIFENLESQESTSVETTESPTDKNEIKLTHNKNNQVSKDPLQHWELKEKELKT
TNKENDPRTQRRIRNKDRPSMAIYQPGMLSKRKQEGSVTETTNQNIENKPSDKV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataacatcacttttggaaacagtttacaaaaaaacttcaacaaaatgaaagaa
aaaaaagtcagacccttaaccaaggtcgttattcgtcgattgcctcctgatatagacaaa
ggaacgtttatggaacaaatatctcctgtgccaaactttgattatttttacttaataaag
gcagatagtttgttaggtgaatttgctttttcaagagcctacatcaactttattaatgtc
gaagatatcttcatatttaaggagaaatttgacagttatgtattcattgatcaaaaagga
catgaatatgctgctgttgttgagtttgcagcttttcaaaagatcccaaaaaaaagaaga
gcacgtcccgacccaaagtgtgccacaattgagtctgatccgtactataaagagttttta
ctttctctcagtgagcaaccaaaacctgaagaaaaaccagaatattcttatcagttttca
tctgaaaataaagaagacctaatgaccacacctttgcttgaatatgtaaaacaaaaaaaa
gtagataaacaaagaatcagagaagaaagaagagatgaaagaaggaaaagagaaattgaa
agaaaaaagtttaaagaagatgagaaaaaaaaatatttggaagaaaagtacaaaccaggt
gccaagtcatattcttctcgtggatcaaagtcatttgtttatggacataaaacaaatgaa
ccagaaatagttgaagaagaagaaacccatttgagaaaaggagaatcaaatactgatgat
ccaaaattattttataaaaacaacagaagaaattttaatcatgataaagtaaaaccaaat
ggtcattacgaatctaaagacttcaaatatagaaaagaagattataaagattatagccgt
gagagaaactttggaaatgtaaagaaaatgagtaagtatgaaactaaacagaatgtcgat
tctgaaaaaaactaccctaaaaaggttaaaaagtatagtgcaataaaggaagaacggaga
aatgaaattaaaaagcatgtgcaaaaaaagtctgaactaaaacatgacgatatcaagaac
acaaatgaagaaatagaacaagaaatttttgaaaacttggaatcacaagaatcaacttct
gtagagacaactgaatcccctacagataaaaatgaaattaaattaacccataataaaaat
aatcaggtttctaaagaccctttacagcattgggaattgaaagaaaaggaattaaaaact
acaaataaggaaaatgacccaaggacacaaagaagaatcagaaacaaggatagaccatca
atggctatctaccaacctgggatgttatcaaaacgtaaacaggaaggaagtgtgactgaa
acaaccaatcaaaacattgaaaataaacctagtgataaagtttaa
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