Agrilus planipennis (emerald ash borer): 108736209
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Entry
108736209 CDS
T07419
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln04120
Ubiquitin mediated proteolysis
apln04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108736209
04120 Ubiquitin mediated proteolysis
108736209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apln04121
]
108736209
Enzymes [BR:
apln01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108736209
Ubiquitin system [BR:
apln04121
]
Ubiquitin ligases (E3)
U-box type E3
108736209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
PARG_cat_N
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
108736209
NCBI-ProteinID:
XP_018324061
UniProt:
A0A1W4WJE3
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MFKAFCQLNIRKRRLARLAALGNDSPSSLTSPPNTPISQSPLSGGLRNQSPLNFDSPTGT
PIEEKCLDLKPKPKLLEEEDKAKTSQCFDCKVDQKFEGVFQIPSKPIDMPSSSKHARHLP
QRSDSETSSIHMEVDEASGCAEKGGNTDIDSGIENMEVEEGDVKREICRQRTTSSSVEMS
EEQIHSTLSRLLSCTFKESSETFTHLPETADLFKEVPNISVTALTSNSIMEMLQQIASGV
NPFKKTDLQDDSSCLNSLSVSPTQNLSPASSPVLNCPIPFLSFKSNELNNEIPSLKLALH
YLMISYAKVGVEERNNPKRSSIPPLSDILSDLREQLINYTALILQGLIFQPAPNALKEGK
SPILVPLLQQTLPRGFISELVARTYTSPDCFANIFTPLLQDLFSMMQTASIVGNEHRQPL
QALGELAEIRCGPNGNLRPICKLLTQQAQFLPETISQSAGREITRTSFFGPFLSISVFAE
DEPKVAEKFFSGNTTSDKSLTQTLQQELENSRVMLHKIFHDVLANASSRDGMLQYLTNLL
KCNEKRAQLQAEERNLAGDGFMLNVLSVLQMLAVKVKLGKIDFYYLFHPSAVIDIKNDTR
LKFSSQETTDWLEEFGKQNQWTEAKFPTQCWFLTLHCHHLALMPALQRFQRRLRAMRDIQ
KLLDDTIATEAQWRDSPFAHRNKQLIKRWKQQVKKLNKSKACADAGLLDKNLLRRSLSFF
TSVAEYLLCLMTNKSPGEINTITLPLSQNIPPVFAALPEWYVEDIAEFLLFTLQYCPVVV
ADNTESSLLTWILITICSSQYVKNPYLIAKIVEVVFVLNPNIQPRTELLYSRLMAHEFSH
TFLPSSLMKFYTDVETTGSSSEFYDKFSIRYHISLIIKSMWSSPIHREALIKESKSGKQF
VRFVNMLMNDTTFLLDESLESLKRIHEVQELITDEEGWSKLPSEQQQSRMRQLSADERQC
RSYLTLARETVDMFHYLTVDIKEPFLRPELVDRLASMLNFNLQQLCGPKCKNLKVKNPNR
YGWEPRRLLSQLVDIYLHLDCESFATALAGDERSFRKELFDDAMVRLERALIKTPVEIEQ
FKALADKANKILIHNQKSEDWLADAPEEFRDPLMDTLMTDPVLLPSGQVMDRSVIMRHLL
NSNTDPFNRQPLTEDMLQPVTDLKERIKVWKLEKIRSTK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggctttttgccaattaaacatacgtaaaagacgacttgcaaggttagcagcc
ttaggaaacgattccccatctagcttaacgtcgcccccaaacactccaatatcacagtct
cccttaagtggcggtttaagaaatcaatcccctttaaattttgattctcctacgggtacg
ccaatagaagaaaaatgcctagatctaaagccaaaaccaaagcttttagaagaagaagat
aaagccaaaacgagccagtgttttgattgtaaagtagaccagaagtttgagggagttttt
cagatacctagtaaaccaattgacatgccttccagttcaaagcacgcgcgacatttaccc
caaaggagtgactctgaaactagttctatacacatggaagtcgatgaggcaagtggctgt
gcagaaaaagggggcaacaccgacattgattcaggaattgaaaatatggaggttgaagag
ggtgacgtaaagagagaaatatgtcgacaacgtactacttcgtcatctgtagaaatgtct
gaggaacaaatacattcgactttgtcccgtttgttgagttgtaccttcaaggagtcctca
gaaacgttcacgcatctaccagagacagcagacctttttaaagaggtgcccaacatatca
gttactgcactaacatcaaacagcatcatggaaatgctccagcagattgcctccggcgtg
aatccgttcaaaaagactgatttgcaggacgacagtagttgtctgaattcactgtctgtg
agtccaactcaaaatttgagtccggcttccagtcctgttctgaactgtcccataccgttc
ctctcgtttaaaagcaacgaactcaataacgaaattccgtcattaaaactagctctgcac
tacctaatgatttcttatgcaaaagttggcgtagaagaacgaaataatcctaaaaggtca
agtattcctcccctgtcggacatcctcagtgacctcagggaacagctcatcaattataca
gctcttatacttcagggtctgatattccaaccggctcctaacgccctcaaagaaggaaag
tcaccaattttagtgcctctactacagcagacgttgcctcgtgggtttatttctgaatta
gttgcaagaacttacactagtcctgattgttttgcaaatatctttacgccacttcttcag
gacctattttcaatgatgcagacggccagtattgtgggaaacgaacacaggcaacctctc
caggctctcggagaactggctgaaatccgttgcggtcccaatggaaacctcaggcccatt
tgcaaacttttaactcaacaggcacagtttttgcccgaaacaatatctcagtctgcaggt
cgtgaaattactagaacgtcgttttttggaccttttctttccatttctgtttttgccgag
gacgaaccaaaagtagccgaaaaatttttctctggtaacacgaccagcgataaaagcttg
actcagacgttgcaacaggaactggaaaattcaagggtcatgctacacaagatttttcac
gacgttttggccaatgccagtagtcgagatggaatgctacaatatttgactaatttattg
aaatgtaacgaaaaaagagcacaacttcaggccgaagaaagaaatcttgctggcgatggg
ttcatgttgaatgttctgagtgtcttgcaaatgttagcagtgaaggttaaattaggaaaa
attgacttttactaccttttccatcccagtgcagttattgacattaaaaatgacacgaga
ctgaaattttcttcccaagaaactaccgattggttggaagaatttggtaagcaaaatcag
tggacagaagcaaagtttccaacccagtgctggtttctgaccttgcactgtcatcatttg
gccttgatgccagccttgcaaaggttccagcgacgattaagagccatgcgtgatattcag
aagcttttagatgacacgatagccaccgaggcccagtggagggacagtcctttcgctcat
agaaataagcaattaattaaacgatggaaacaacaagtcaagaaacttaataaatcaaaa
gcgtgtgctgatgctggcctattagacaaaaatttacttagaagatcgttatcattcttc
actagtgttgcggaatatttgctttgtttaatgaccaataaaagtccaggagagatcaat
acaatcacgttaccgctttctcaaaacattccacctgtcttcgcagccttgccagagtgg
tacgtggaagatatcgcggagtttctcctcttcaccctacagtattgccccgttgtggtg
gctgacaacacagaaagttcactgctcacgtggatcctgataacgatttgctcgtcacag
tatgtaaaaaatccgtacctgatagccaaaatagtggaagttgttttcgtactaaatccc
aacatacaaccccgaactgaattgttatactcgcgacttatggcacacgagttctcacac
actttcctgcccagtagtctcatgaaattctacacagacgtcgaaacaactggttcaagt
tcagaattctacgataaattctctattcggtatcatatcagcttaataataaaaagcatg
tggagttctccgatccatcgcgaagccctaataaaagagtctaaaagtggtaaacaattt
gttcgtttcgtaaacatgctaatgaacgacacgacctttctcttggatgaatctttggaa
agtttgaaacgtattcacgaagtccaggaactgataactgacgaagaaggctggagcaag
ttgccctccgaacagcagcagtctcgtatgcgtcagctgagcgctgatgaacgtcagtgt
aggtcttatctgacccttgctagagaaactgtcgacatgttccattatttgacggtggac
attaaggagccgtttttaaggcccgaattggtcgacagattggcgagtatgctcaatttt
aatttgcaacagttgtgcggacccaagtgcaaaaatttaaaggtaaagaatcccaaccgg
tacgggtgggaaccgaggagactcttgagtcaattagttgacatttatttgcacctggac
tgtgaaagcttcgccacagccttagcaggagatgagcgttcgtttagaaaagaactgttc
gatgatgccatggtacgtttggaaagagctttgataaagactccggtggaaatagagcaa
ttcaaggccctagcagacaaagcaaataagattttgatacacaatcagaaatcagaagat
tggctagcagatgcccctgaggagttccgtgatcccctcatggacacattgatgaccgat
ccggtgctactaccaagtggccaggttatggacaggtcagttatcatgcggcacctgttg
aatagcaacacagacccattcaacagacaaccactgactgaagacatgttacaaccagtg
accgacttaaaagaaagaataaaagtttggaaattggaaaaaattcgttcgactaagtaa
DBGET
integrated database retrieval system
