Agrilus planipennis (emerald ash borer): 108736352
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Entry
108736352 CDS
T07419
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108736352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apln03041
]
108736352
Spliceosome [BR:
apln03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108736352
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_DCAF4
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
WD_LRWD1
WD40_like
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_SPT8
WDR54
Beta-prop_IFT122_2nd
DUF3967
Motif
Other DBs
NCBI-GeneID:
108736352
NCBI-ProteinID:
XP_018324248
UniProt:
A0A1W4WVT3
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MSDDEEVAYVKKTKTIHYGSLEDTEKARLAELEINGSTNEDDASKNSVQNSAQINISNEY
MELEDNISKEKQALLEEFERRKKARQINVSTDDAEVKRNLRQLGEPICLFGEGPADRRNR
LREILSCIGEDAIIKREVQEEKKLLEKDQETTWYHEGPETLRIARLWIAEYSLPRAKERL
EEAKLMKDLPPATKTARWQELQKKLQSITIHSSQIGDTRPISFCQFSPNSKLLATASWTG
VCKLWSVPDCELKQTLKGHTCNVGAIVFHPQATLTQEKNVCNMVTCASDGSVKLWNFESD
EPIADIEGHMPHRVSRVAFHPSGRFLGTCCFDCSWRLWDLQQCTEVLHQEGHVKPVYCIS
FQVDGSVCATGGLDSFGRVWDLRTGRCIMFMEGHLKSIYGIDFSPNGYHIATASEDNTCK
IWDLRKRNLLYTIPAHTNLISDVKFQKGAGDYLVTASYDNTVKIWTSRTWQPLKTLSGHD
GKVMSVDISSDDQFIATSSYDRTFKFWAPE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatgaagaagtggcttatgttaagaaaacgaaaactatccattacggttct
ttagaagataccgaaaaagcgaggttagctgagttagaaataaatggtagtactaacgaa
gatgatgcctccaagaattctgtacaaaattcggcacagattaacatttccaatgaatat
atggaattggaagacaatatatcgaaagaaaagcaagctctcttggaagaattcgaaaga
agaaaaaaggccagacaaataaacgtatcaacggatgatgctgaagtgaagcgaaactta
agacaacttggggaaccaatttgcctttttggagaagggccagctgatcgaaggaataga
ctaagagaaattttgtcttgtataggtgaagatgcaattattaaacgagaggttcaggaa
gagaaaaaacttcttgaaaaggatcaagaaacaacatggtatcatgaaggaccagaaact
ttaagaattgcaagattatggatagcagaatattctttgccaagggccaaggaacgtcta
gaagaagctaaactcatgaaagatttaccacctgctactaaaacagcccgttggcaagaa
ttacagaaaaagttgcagagcataactatacacagcagtcaaattggtgacacaagacct
atatcattctgtcagttcagtcctaattcaaaattactggccacagcttcatggactggt
gtatgtaaattatggtctgtacccgattgtgaattaaagcaaaccctcaaggggcacaca
tgtaacgtcggtgctatagtatttcacccccaagccactttaacccaagaaaaaaatgtc
tgcaacatggtaacatgtgcttcagatggatcggtgaagttatggaactttgaaagtgat
gaaccaatagcggatattgagggtcatatgcctcatagagtgtcaagggtcgcattccat
ccttctgggagatttttaggcacatgctgttttgattgctcatggagactttgggatctt
caacagtgcactgaagtgctgcatcaagaaggtcacgttaaaccagtgtattgcatcagt
ttccaagttgatgggtctgtgtgtgcaacagggggtcttgattcttttggtcgtgtttgg
gatctacgtacaggacgttgtataatgtttatggagggtcatttaaagtcaatttatggc
attgatttttctccgaatggatatcacattgctacagcaagtgaagacaatacttgcaaa
atttgggacttgcggaagagaaaccttttgtacacaattcctgctcatactaatctgata
tcggatgtgaaattccaaaaaggggccggtgattacttagtaactgcttcatacgataac
actgtgaaaatatggacgagcaggacgtggcaacctttaaagacgctttcaggacacgac
ggaaaagttatgagcgtcgacatttcgtctgatgatcaattcatcgcaactagttcgtat
gataggacgtttaagttttgggcacccgagtga
DBGET
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