Agrilus planipennis (emerald ash borer): 108736372
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Entry
108736372 CDS
T07419
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03015
mRNA surveillance pathway
apln03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108736372
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108736372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108736372
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108736372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
108736372
NCBI-ProteinID:
XP_018324274
UniProt:
A0A1W4WK22
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MAENDIDLYADDIDQDFAQDDFVGENVDLYDDVISTPATGGGGGDNAETNHNSNADTNNE
ETNGTTTYQTQGNNITPTTIGRRHQLYVGNLTWWTTDQNIADAVRDIGVNDFHEVKFFEH
RANGQSKGFCVISMGSEASVRLCMERLPKKEINGQNPVVTYPTKQALSTFESQSKTRPSP
PNSSGPRGQHPGQSNQNIPSQNFPRMPMGSPMRGPLPHPGMQGPQGPRMQGPPPGFNGPP
GQMNQGPPRFQNPQWNGPRPNGPMPGPGPNPAQMRPGAPPPGMQGPPRPPMDGMYLEDLF
QQQFQGPPQQQGPPRGPPNQGPPPQGGGPRPDWNRPPMQQGFPPQGPPMQGPPNMAPRGP
PPMSGPPGVPQQGPPQGPPAPHVNPAFFQQGGPPPQMQHPGMQPGPGGMPPHHGPPQGPP
HGPPHGPPMGPNQVPPHGPPHSYGPPSGVPQSQYGGPGSVAPDHRPDIAQLSEQEFEDIM
SRNRTVSSSAIARAVSDAAAGEYASAIETLVTAISLIKQSKVAADDRCKILISSLQDTLR
GVEDKSYSSGRRDRSRSRERTHRRGRRDRSSSRYRERSRDRDRDRDRDRERDRYYSDYRE
RDRERDRSRSRGERERERERERDYRDRDAEDSSRVSRPRKSSPEAVDAAGDPSSKSRYYE
DRYRERESGRRDAERERDRDRDRRDESHRSRH
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacgacatagatttgtatgctgacgatatagatcaagattttgcacaggac
gatttcgttggtgaaaatgtcgatttgtacgatgatgtcatttcaacccctgctacagga
ggcggtggtggagataacgctgaaacaaatcataattcgaatgctgatacaaataatgaa
gaaacaaatggtacaacaacttatcaaacccaggggaataatataacacctactacaatt
ggtcgtagacatcaattgtatgttggaaatttgacttggtggacgactgatcaaaacata
gccgatgctgttcgtgacattggcgtgaacgattttcacgaagtaaaattttttgagcat
cgcgcgaacggacaatccaaaggtttttgcgttatttcaatgggttcggaagcgagtgtt
cgattatgtatggaacgtttgccgaaaaaagagataaacggtcaaaatccagttgtaacg
tatcccacgaaacaagcattaagtactttcgaaagtcagtcgaaaacgcgtccttcgcca
ccgaactcttcaggtcccagaggtcaacacccggggcaatcaaatcaaaacattccttca
caaaatttccctcgtatgcctatgggttcacccatgagaggtcccttaccccatccgggt
atgcaaggacctcaaggtccgaggatgcaaggtcctccaccgggttttaacggtcctccg
ggacaaatgaaccaaggacccccaagatttcagaatccacagtggaatggtccgcggccg
aatggacctatgcctggtccaggaccaaatcctgcacagatgagaccaggtgctccacct
cctggaatgcaagggccacctcgaccaccgatggacggcatgtatcttgaggacttgttt
cagcaacaatttcaaggacctcctcagcaacaaggtccacctcgtggtccgcccaatcaa
ggacctcctcctcaaggtggtggtccgagacctgattggaatcgaccgcccatgcaacag
ggatttcctcctcaaggcccaccaatgcagggaccacctaatatggcacccagaggtcct
ccacctatgagtggcccaccaggagtaccgcaacaaggaccgcctcagggaccacctgct
ccccacgtgaatcccgcattcttccaacaaggcggacccccaccacagatgcaacatcct
ggtatgcaaccaggtccagggggtatgccgccacatcacggaccaccacaaggtcctcct
catggtccaccgcacggtcctcctatgggtcccaaccaggtacctccccacggacctccg
catagttatggtccgccgtcaggtgtgccccaatctcagtatggaggtcccggttctgtg
gctccggatcatcggccagacatagctcaattaagtgagcaggagttcgaagacataatg
tcgcgcaaccgaactgtatcgagttcggcgatagcacgggcggtatcagatgcggctgct
ggagagtatgcgagcgcgatagaaacgcttgttacggccatctcgttaatcaaacagtca
aaggttgcggctgacgatcgatgcaagatattgataagttcgttgcaagacacattaaga
ggggtcgaagataagagttacagttcgggacgcagggaccggtcaaggtccagagaaaga
acccacaggagaggaagacgcgacaggtcatcttcaaggtatagggaaagaagtagagat
agagatcgtgatcgtgatagagatcgtgaacgtgatcgatattattctgactacagggaa
cgggatagggaaagagatagatctcgcagtagaggcgagagggaacgtgaacgtgaaaga
gaaagagattacagagacagggacgccgaagattcttctcgcgtgtcccgcccaaggaaa
tcttcaccggaagcagtggacgcagcaggagatccctcgtcaaaatctcgttattacgaa
gatcgctacagagaacgcgaatcaggcaggagagatgccgaacgggaaagggaccgtgac
cgagatcgtagggacgagtcccatcgttcacgacattaa
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