Agrilus planipennis (emerald ash borer): 108736601
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Entry
108736601 CDS
T07419
Name
(RefSeq) ATP-dependent RNA helicase WM6 isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03013
Nucleocytoplasmic transport
apln03015
mRNA surveillance pathway
apln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108736601
09122 Translation
03013 Nucleocytoplasmic transport
108736601
03015 mRNA surveillance pathway
108736601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108736601
03041 Spliceosome [BR:
apln03041
]
108736601
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108736601
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108736601
Spliceosome [BR:
apln03041
]
Complex C
Other components
EJC/TREX
108736601
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108736601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
108736601
NCBI-ProteinID:
XP_018324577
UniProt:
A0A1W4WKZ6
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADADDLLDYEDEENPEQTANDTANNTDQKKGVKGTYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHT
RELAFQISKEYERFSKYMPNIKVGVFFGGLPIQKDEEVLKNNCPHIVVGTPGRILALVRS
KKLNLKHLKHFILDECDKMLELLDMRRDVQEIYRNTPHDKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVA
LAQLLTEQNFPAIGIHRGMNQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITFVSEESDAKILNEVQDRFDVNITQLPDEIDLSS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgctgacgatcttcttgattatgaagatgaagaaaatcctgagcagactgca
aatgatacagccaacaatacggatcagaagaaaggtgtgaaaggtacttatgtgtctatt
cacagttctgggtttagagattttcttctgaaaccagaaattttgagagcgattgttgat
tgtggttttgagcatccgtctgaagtgcaacatgaatgcataccacaggcagtccttggt
atggatatattgtgtcaagcaaagtctggtatgggaaaaacagctgtttttgttttggct
acattacaacagttggagcctacagaaaatgttgtttatgttcttgtaatgtgtcacaca
cgagaattggcattccaaataagcaaagagtatgaacgttttagtaaatacatgcccaat
ataaaagttggggtgttttttgggggacttccaattcagaaggacgaggaagtactaaaa
aacaattgtccacatattgttgttggaactccaggaagaatacttgctcttgttagatcc
aagaaactcaatttgaaacatcttaaacactttattctggatgagtgcgacaaaatgctg
gaattattggatatgaggagggatgtccaagaaatttatcgtaatacacctcacgataag
caagtgatgatgttcagcgccactcttagcaaagaaattcgtcctgtttgcaagaaattt
atgcaagatccaatggaagtttatgtggatgatgaagcaaaactgactttacacggtctt
caacagcattatgtaaaactgaaggaaaatgaaaaaaataaaaaactctttgaattactt
gacgttttagaatttaatcaggttgtgatatttgtaaagtcagtgcaaaggtgtgtggca
ttggcacaattactaacggaacaaaatttccctgccatcggcattcatcgaggcatgaat
caagaagaaagattgtcacgttatcagcaatttaaagattttcagaagcgtattcttgtt
gcaacgaatctttttggtcgtggaatggacattgaaagggtaaacatcgtgttcaattac
gatatgcctgaggattcagacacgtatttgcacagagtggcgcgagccggacgattcggt
acaaaaggcctcgctataacattcgtttctgaagaaagtgacgcaaagattctaaacgaa
gttcaagatagatttgatgtgaatattactcagctacccgatgaaatagatctcagttca
tacattgaaggtcgatag
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