Agrilus planipennis (emerald ash borer): 108737103
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Entry
108737103 CDS
T07419
Name
(RefSeq) DNA repair protein RAD50 isoform X2
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03440
Homologous recombination
apln03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108737103
03450 Non-homologous end-joining
108737103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apln03032
]
108737103
03400 DNA repair and recombination proteins [BR:
apln03400
]
108737103
DNA replication proteins [BR:
apln03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
108737103
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
108737103
BRCA1-C complex
108737103
NHEJ (non-homologous end-joining)
MRX complex
108737103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
Rad50_zn_hook
SbcC_Walker_B
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108737103
NCBI-ProteinID:
XP_018325283
UniProt:
A0A1W4WYQ6
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MTTLKKLLINGVRNFNPEDGNQLIKFSAPLTLFIGQNGCGKTTIIECLKYACSGELPGCS
DRGQGFLYDPKLNGELVTCAQIRLRIRTEKGDTYTISKSMNVTVRNNNLTFKKVDHSLKL
QKVGEKDEQMVSGRCVDVDVFFTETFGVSKSIINNVIFCHQEDSLWPLDEGSKLKKKFDE
IFEVTKYHKCADHIRKKIKESEHRIDVMKNDLFRLEDKNKECESKQISLVEKEERYAKYA
TEIMEKEEKLEPIMARIREICELQKHLTHFHEEKSAKLSEKKMIMQHIDKLLKNLKGYEF
KGSEDELNNEIQNFDRYRHEIDDKLTSLSKKKSEIDMQEHTNTQKKSKLLAELGKLQQEK
KNHLEKIMKRKELLQQMENLLKVNIINGQNEDDADVTNASNIIKNAIERLRTSLKQLFVE
INENETLLQNTIDECRDKCNKVKHDIESKNGQISENIKKLREKKNQLQELSFSDDQLATL
TNKIASVEKELQSVKEKFETQNVSQFSIDKEKSTIKNLEEKLEQLDEEMKIMLKNSITEA
DMERRLFDMKKQENELIKLKNKHHDNFEIIFSNEIPQRNLKIAVGEIRTSNSKKVAEITR
KINQQQNMLTRKEAQLKFAQQKLQAFEDEMISCREKLAAVCKDQTYERTKAYVTMATEKL
RKDKGQFSSAKILYEKFIEEFENDKCCPLCRSQFDNKEQVMAEIVSDLKQKIKEIPMRLK
KVEDDLKQKESELDKITELASVNGKIKELSEKQIPLASFEVDELTDVCEQLRVELETLKN
DLERPQQLELVCNEVLPDATLMDQINLEIVSLKSAIENLHLQIIKTDSNRTKQETETEIE
NVKMELGNSRRVYENAIKKIQLYNNRCQELRESKSEFIQQQLNIQKQIQGKPQLEQQLID
ISTETDQLKSEIRSLEESLPALQNDLTRAEKVQQEEKIKNKEKVATVQDSLYENEKLFEN
IEKLTIEINEYVNKNKDAIFEKMLDSSAKLEDLLQNLKTTKSEIADEINDLNTKRCNLEL
KFRNLTDNLDLIDKRKRHSSLDQEIEELSQKIGDFDEKTLFDEKLKLERSGGRINQEINN
CKGKSDELKNSIDDLKAELDKPDLKLAKLNYRYKLYEVGIEEQIVEDLKQFLVGFEFSIM
HFHQERMEEINKTIKDYWHLIYKGNDIDYIEIKTEQDGKSTSKRRVYNYKVVQVKNDIMM
EMRGRCSAGQKVLASIIIRLALAETFSRKCGILALDEPTTNLDRTNINGLCEALITLVET
KADEKNFQLLIITHDEEFMNALTAIDKVEFINRVERNKDGHSTIKIEHL
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgacgactctgaaaaagttgttgataaatggcgttcgaaattttaatccggaggatggg
aaccaattaataaaattttccgcaccgttgacgctgttcattggtcaaaacggttgtggt
aaaacaaccataatagaatgtctaaaatatgcatgttccggtgaattgccaggttgttcg
gacaggggccaaggatttctttacgatcccaaattaaatggcgaactggttacctgtgcg
caaataagactcagaattagaacagaaaaaggagatacatacacgatatcaaaaagtatg
aacgtaacagttagaaataacaatcttacattcaaaaaagttgatcactctttaaaactg
caaaaggtgggggagaaagacgaacagatggtatcgggtagatgtgtggacgtggatgtt
ttttttactgaaacatttggtgtttccaagtcgataattaataatgtaattttctgccac
caagaagattctctttggcctttggacgaaggatccaagttaaagaaaaagttcgacgaa
atttttgaagttaccaaatatcacaaatgtgcagatcacattcgcaagaaaattaaagaa
agtgaacaccgaattgatgtaatgaaaaacgatttgtttcgtttggaagataaaaacaag
gagtgtgagagcaaacagataagtttagtcgaaaaggaagaaagatatgcaaaatacgca
actgaaataatggaaaaagaggaaaaactagaacccatcatggctcgtattagagaaata
tgcgaattacaaaagcatcttactcactttcatgaagaaaaatctgcgaaattgtctgag
aaaaaaatgataatgcaacacatagataaacttttgaaaaatttaaaaggatacgaattt
aagggctcggaagatgagttaaataatgaaattcaaaacttcgatagatatcgccatgaa
atcgatgacaagttaacgtcgctttctaaaaagaaatcagaaatagacatgcaagaacat
actaatactcaaaaaaaatctaagcttttagctgagttaggaaaattacaacaagagaaa
aaaaatcacttggaaaagatcatgaaacgaaaggaactacttcaacagatggaaaactta
ctaaaggtgaacatcataaatggccaaaatgaagacgatgcagatgttacaaatgccagt
aatataataaaaaacgcaatcgaaaggcttcgaacctcgttaaaacaacttttcgttgaa
ataaacgaaaatgaaactctacttcaaaacaccatagatgaatgcagagataaatgtaat
aaagttaagcacgatatagaatctaaaaacgggcaaataagcgaaaacatcaaaaagttg
cgcgaaaagaaaaaccaattgcaagaattatcattttctgacgatcagttagcaacatta
actaataaaatagcatctgtagagaaggaactgcaatcagtgaaggaaaaattcgaaacg
caaaacgtatctcagttcagtatagataaagagaaatccaccattaagaacttagaagaa
aagttggaacaactcgacgaagaaatgaaaattatgttaaagaatagcataacggaagcg
gatatggaaagacggctgtttgacatgaaaaaacaagaaaatgaattaataaagttgaaa
aacaaacatcatgataattttgaaataattttttctaatgaaattccacaacgaaaccta
aaaattgcagttggagagataagaacgagtaattctaaaaaagtggcggaaataactaga
aaaattaaccaacaacaaaacatgttgactcgtaaagaggcccagttaaagttcgcccag
caaaaacttcaagctttcgaagacgagatgatatcttgtagagagaaactcgccgcagtt
tgtaaagaccagacatatgaaagaacaaaggcgtacgtcacgatggccaccgaaaaatta
cgcaaagacaaaggacaattttcttccgcaaagatattatacgaaaaatttatagaagag
tttgaaaatgacaagtgttgtcctttgtgccgttcgcaattcgacaataaggaacaggtg
atggctgaaatcgtttcggatcttaaacagaaaattaaagaaattcccatgagattaaaa
aaagtagaagacgatctcaaacagaaagaaagtgaacttgataagatcaccgaactcgca
tccgttaatggtaaaataaaagaactttccgaaaagcaaatcccattagctagttttgag
gttgacgagttaactgacgtttgtgaacaacttagagtggaattggaaactctcaaaaac
gatttggaaagacctcaacaacttgaacttgtttgtaacgaggtgcttccagatgccaca
cttatggaccagattaatttagaaatagttagtttgaagtccgccatcgaaaatttgcat
ttacaaatcatcaaaaccgattcgaatcgtacaaagcaagagacggaaacagaaattgaa
aacgtaaaaatggagcttggaaattctcgacgagtttacgaaaacgcaattaaaaaaata
caactctacaacaatcgttgccaagaactccgcgaatcgaaaagcgaatttattcaacag
cagctaaatatacagaaacagattcagggaaagccccaactagagcagcaactgatagac
atttctactgagacagatcagttaaagagcgaaattagaagtctggaggagtctctgcca
gcgctacaaaacgatcttacacgcgccgaaaaagttcaacaagaggaaaaaataaaaaac
aaagaaaaagtagccacagttcaagacagtttgtatgaaaacgaaaagttatttgaaaat
attgaaaaattaacgatagaaattaatgaatacgtaaataaaaacaaagacgctattttt
gaaaaaatgctggatagttcggcaaaactcgaagatctccttcaaaatttaaaaacgacc
aagtcagaaatagccgatgaaataaacgatttgaatacgaaacgttgcaatttagaactc
aaatttcgcaatttaaccgataacttagatctgatcgacaaacgaaaacgccattcgagc
ctcgaccaggaaatagaagagttatcgcaaaaaatcggagacttcgatgaaaaaacacta
ttcgatgagaaattaaaacttgaacgtagcggtggtcgaataaatcaagaaataaataac
tgtaaaggaaaaagcgacgaattaaagaattcgattgatgatttaaaagcagaacttgac
aaacctgatttgaaattagcaaaactcaattacaggtacaaattatatgaagttggaatc
gaagagcaaatcgtcgaagatttgaagcagttcctagttggatttgaattttccattatg
catttccatcaggaaagaatggaagaaatcaataaaaccataaaagattactggcatttg
atctataagggcaatgatatagactatatcgaaataaagacagaacaagatggaaaatct
acatccaagagacgtgtttacaattataaggttgttcaagttaaaaacgatataatgatg
gaaatgagagggagatgtagcgcaggccaaaaagttctggccagcataattattcgatta
gctttggcagaaacattcagtcgtaaatgtggcatactggctttagatgaaccgacaact
aatttggacagaactaatataaacggtttgtgcgaagctcttattacattagttgaaacc
aaagccgatgaaaaaaacttccagttattaataataacacacgatgaagaatttatgaat
gcactcactgctatagataaggtagaattcattaatagagtcgagagaaataaagatgga
cattccactattaaaattgaacatttatag
DBGET
integrated database retrieval system
