Agrilus planipennis (emerald ash borer): 108737155
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Entry
108737155 CDS
T07419
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108737155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apln03021
]
108737155
03019 Messenger RNA biogenesis [BR:
apln03019
]
108737155
Transcription machinery [BR:
apln03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108737155
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108737155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-CCHC_2
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
108737155
NCBI-ProteinID:
XP_018325353
UniProt:
A0A1W4WYY0
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MECIIANVDNVKFDIEVALDEQYGALPLPFSGMDKSIAAVCQFFASPLGCQKGPLCPFRH
VRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYSRFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLSGFCPDGSNCKYMHPRFELPAPPDQNL
KDQKKPPVIICHFCGEHGHKAIHCNKMNPDVKDNIQSEGNRTVNVINNCNISNTNVESNE
NQQSLFTRNVPKKLEDVTCYKCGTKGHYANRCPKGHLAFLSSQYKNDKDAAD
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtattatagcaaatgtcgataatgttaagttcgatattgaggtcgcattagat
gaacaatatggagctttgccattaccgttttctggaatggacaaatcgattgctgctgtt
tgtcaattctttgcgtctcccttgggttgtcaaaaagggcccttgtgtccttttagacat
gtacgtggcgatagaaccattgtttgtaaacattggcttcgagggttgtgtaaaaaagga
gatcagtgtgaattcttacatgagtatgacatgtcgaagatgcctgaatgttatttttat
tcaagatttaatgcatgccataacaaagaatgtccatttctgcatatagatcccgaaagt
aaaattaaagactgcccttggtatgacaggggtttctgccgtcatggtccacattgtaga
catagacatgttagaagggtgctatgtacaaactatttatcgggattttgtcctgatgga
tcaaattgtaaatacatgcatcccagatttgaattgcctgcaccacctgatcaaaattta
aaagatcagaagaagccacctgtaataatttgtcatttttgtggtgagcatggtcataaa
gcaatacattgcaacaaaatgaatccagatgtgaaagataatattcagagtgagggaaat
agaactgttaatgtaattaacaactgcaatattagcaacactaatgtagaaagtaatgaa
aatcaacagtcgttgtttactcgaaatgtacctaaaaagttggaggatgtgacatgttat
aaatgtggaacaaaaggtcattatgctaacagatgcccaaaaggacatttggcctttctt
tcatctcagtataaaaatgataaagatgctgctgattag
DBGET
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