Agrilus planipennis (emerald ash borer): 108737252
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Entry
108737252 CDS
T07419
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108737252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108737252
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108737252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
GIP1_N
AAA_22
UBA_NBR1_C
TEA
Motif
Other DBs
NCBI-GeneID:
108737252
NCBI-ProteinID:
XP_018325494
UniProt:
A0A1W4WNJ6
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MSRHRNVRSMNYSEEYDGYDDVYGHSVEDDYCVSPSEAAFMYDREGSKNKQKIGAFFQTV
SNIAEEHEGEVDSKGSGSDIEEARLQSCIDQVKETLGSSFSIKEIVLSLKKNNFDIEKTI
NDLLMKRADGELKQETDKKGKAITTPHPQKAQVVSSNQTTVNVTKGFDLAQKDISRLCPT
PRSESPGSGRVTPINVQSNENEEKPKHKSYGKDDVLNNYKKDRSGEKEHLYMIVIGHVDA
GKSTLMGHLLCALGQVNQKTMHKYEQESRKLGKQSFVYAWVLDETGEERNRGITMDVGKS
QFETNSKIVTLLDAPGHKDFIPNMIAGAGQADVAVLVVDATRGEFETGFDYGGQTREHAL
LVRSLGVSQLAVAINKLDTVNWSKERFDEIIQKLKVFLKQAGFKDNDVAFVPCSGLTGQN
LVVKPTQKELIEWYQGPTLIEVIDNFRVSERPILKPLRFSVNDVFKGTGSGFCVSGKVET
GSLSVGDKVLICPSREVASVKGLLTDDSPKQVVYAGDQAQVTLSGIEMQNVSVGNIICDP
QNPVHVTTKFQARVVIFNIAVPITKGYSVVLHHQSLVEPVIVSKLIAQLNKSTGEVIKKH
PRCLTKNTSALIEIQVSRPIGVELYSDCKELGRIMLRVGGATIAAGLITKIL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacatcgcaatgtgagatccatgaactactcagaagagtacgatggatatgat
gatgtttacggacattctgtggaagatgactactgtgtttctcctagtgaagctgctttt
atgtatgatagagaaggatcaaaaaataaacaaaaaataggagcattttttcaaacagtg
tcaaatatagccgaggaacacgaaggagaagttgattcaaaaggctctggttctgacatc
gaggaagcccgtttacagtcttgcattgatcaggtcaaagaaactttaggttcatcattt
tccattaaagaaatagttttgtctctcaaaaaaaataatttcgatattgaaaaaaccata
aatgatttattgatgaaaagggctgatggagaattaaaacaggaaactgacaaaaaaggg
aaagccattacaactcctcatccgcaaaaggcccaggtggttagttcgaatcaaacaact
gttaacgtaacaaaaggattcgatcttgctcagaaggatattagtcgactatgtcctacg
ccgcgttccgaatcacctggatcaggacgcgttacgcccataaacgttcagtccaatgaa
aatgaggaaaaacctaagcataaatcttatggcaaagacgacgttttaaataattataaa
aaggacagaagcggcgagaaagaacatttgtatatgattgttattggtcatgtagatgct
gggaagtctacgcttatgggacatttactttgtgccctgggccaggtgaatcagaaaact
atgcataaatatgagcaggaaagtagaaaattaggtaaacagagctttgtatatgcgtgg
gtactagatgaaacaggagaagagcgaaacagaggcatcacaatggatgtggggaagtca
cagtttgaaacgaatagtaaaattgtgacgttgctggatgctccgggacacaaagatttc
ataccgaacatgatagcaggagcgggtcaagcagacgttgctgtattggtagttgatgca
acaaggggtgaattcgaaacaggtttcgactatggtggtcagacgcgggaacatgctctt
ctggtgcgttcactgggagtgagtcaactggccgtcgcaattaataaattagatacagta
aactggtccaaggaacgatttgacgaaattattcagaaattgaaggtgtttctaaaacaa
gccggatttaaagataatgacgttgcatttgtaccgtgcagcggccttactggtcaaaat
ttagtcgttaaacctacccaaaaggaacttatcgaatggtaccaaggacccactttaatt
gaggtcattgataacttcagagtttctgaacgcccaattcttaaaccccttaggttttcc
gtaaatgatgtttttaagggtacaggttctggtttctgcgtttctggaaaagttgaaaca
ggaagtttgtcagtcggtgataaagtgcttatttgtccgagcagagaagttgcttcggta
aaaggtctgttaactgacgattctccgaaacaggtcgtttatgcaggtgaccaagcgcag
gtaactctttctggtatagaaatgcaaaatgtgtcagtagggaacataatttgcgacccg
caaaaccctgtacatgtcactacgaaatttcaagcgagggtagttatttttaacatcgca
gtacccattactaaaggatattccgtcgttttacatcatcagagtttggttgaaccagta
attgtcagtaaattgattgcgcaattaaataaaagtacaggcgaagttattaagaagcac
ccaaggtgtctcacgaaaaatacgagcgctctaattgaaatacaagtatccagacctatc
ggtgtcgaactatatagtgattgcaaagaacttggtagaattatgttaagagttggtggt
gctactatcgctgctggacttataacgaaaattttataa
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