Agrilus planipennis (emerald ash borer): 108737597
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Entry
108737597 CDS
T07419
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03030
DNA replication
apln03410
Base excision repair
apln03420
Nucleotide excision repair
apln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108737597
03410 Base excision repair
108737597
03420 Nucleotide excision repair
108737597
03430 Mismatch repair
108737597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apln03032
]
108737597
03036 Chromosome and associated proteins [BR:
apln03036
]
108737597
03400 DNA repair and recombination proteins [BR:
apln03400
]
108737597
DNA replication proteins [BR:
apln03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108737597
DNA Replication Termination Factors
ELG1-RFC complex
108737597
Chromosome and associated proteins [BR:
apln03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108737597
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108737597
Check point factors
HRAD17(Rad24)-RFC complex
108737597
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
AAA_14
AAA_16
AAA_22
Mg_chelatase
Rad17
nSTAND_NTPase5
RuvB_N
Viral_helicase1
AAA_assoc_2
TniB
AAA_18
NTPase_1
DNAX_ATPase_lid
AAA_5
nSTAND3
AAA_19
AAA_11
RNA_helicase
Gp44_lid
AAA_24
AAA_25
AAA_3
MeaB
IstB_IS21
ABC_tran
AAA_2
bpMoxR
AAA_28
AAA_7
DUF6933
MipZ
Motif
Other DBs
NCBI-GeneID:
108737597
NCBI-ProteinID:
XP_018326038
UniProt:
A0A1W4X0W3
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
METSMEIDEVPQSHSSKSSMNAKIKHHNIPWIEKYRPEKFEDIVGNEDTVRRLAVFAKQG
NVPNIIVAGPPGVGKTTVVLCLARTLLGPSFKDAVLELNASNDRGIDVVRNKIKMFAQQK
VTLPPGRQKIIILDEVDSMTEGAQQALRRTMEIYSNTTRFALACNYSEKVIEAIQSRCAI
LRYSKLTDAQILARIIQICQKENVEYTEDGLEAIVFTAQGDMRQALNNLQSTHNGFGVVN
SENVFKVCDEPHPLLIKEMLMHCIDANIRKAYKIMEHLWNLGYAAEDIIKNLFKVCKNLD
IHELLKLEFIKEIGVTHQRIVDGTISLLQMSGLLSRMCLHGKHFQGRK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggagacaagtatggaaattgatgaagtaccccagtcacactcttcaaaatctagcatg
aatgcaaagataaaacatcacaacatcccttggattgaaaaatatcgtccggaaaaattt
gaagatatcgttgggaacgaggatacggttaggagattggcagtttttgctaaacaagga
aatgtaccaaatataattgttgctggccctccaggtgttggtaaaactacagtagtattg
tgtcttgcaaggacacttctgggaccctcatttaaggatgctgtattggaattaaatgcc
tcaaatgatagaggaatcgatgttgtaagaaataaaataaaaatgtttgcccagcagaaa
gtaacacttcctccaggacgacagaaaattattatattagatgaagttgatagtatgaca
gaaggggcacagcaggctttaagaaggacaatggaaatatatagcaacacaacaagattt
gctttagcctgcaattatagtgaaaaagttatcgaggctattcagtctcggtgtgcgata
ttaagatactcaaaattgactgatgctcaaattttagcaagaattatacagatatgccaa
aaggaaaatgtagagtacactgaagatggactggaagctatagtatttactgcccagggt
gatatgaggcaagcactaaataatttgcaatcaactcacaatgggtttggtgtagtaaac
tccgagaacgtattcaaagtttgtgatgagcctcatcctttattgatcaaggaaatgtta
atgcattgtatagatgcaaacatcaggaaagcttataaaataatggaacacttgtggaac
ttgggatatgcagctgaggatattatcaaaaatttgttcaaagtttgcaagaatttggac
atacatgaactgctgaagttagaattcattaaggagattggtgtaactcatcaaagaatt
gttgatggtactatcagtttgttacaaatgtctggacttctttcaagaatgtgcttacat
ggtaaacattttcaggggagaaaataa
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