KEGG   Agrilus planipennis (emerald ash borer): 108737597
Entry
108737597         CDS       T07419                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
apln  Agrilus planipennis (emerald ash borer)
Pathway
apln03030  DNA replication
apln03410  Base excision repair
apln03420  Nucleotide excision repair
apln03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:apln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108737597
   03410 Base excision repair
    108737597
   03420 Nucleotide excision repair
    108737597
   03430 Mismatch repair
    108737597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apln03032]
    108737597
   03036 Chromosome and associated proteins [BR:apln03036]
    108737597
   03400 DNA repair and recombination proteins [BR:apln03400]
    108737597
DNA replication proteins [BR:apln03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108737597
  DNA Replication Termination Factors
   ELG1-RFC complex
    108737597
Chromosome and associated proteins [BR:apln03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108737597
DNA repair and recombination proteins [BR:apln03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108737597
  Check point factors
   HRAD17(Rad24)-RFC complex
    108737597
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 RCF1-5-like_lid AAA_14 AAA_16 AAA_22 Mg_chelatase Rad17 nSTAND_NTPase5 RuvB_N Viral_helicase1 AAA_assoc_2 TniB AAA_18 NTPase_1 DNAX_ATPase_lid AAA_5 nSTAND3 AAA_19 AAA_11 RNA_helicase Gp44_lid AAA_24 AAA_25 AAA_3 MeaB IstB_IS21 ABC_tran AAA_2 bpMoxR AAA_28 AAA_7 DUF6933 MipZ
Other DBs
NCBI-GeneID: 108737597
NCBI-ProteinID: XP_018326038
UniProt: A0A1W4X0W3
LinkDB
Position
Unknown
AA seq 348 aa
METSMEIDEVPQSHSSKSSMNAKIKHHNIPWIEKYRPEKFEDIVGNEDTVRRLAVFAKQG
NVPNIIVAGPPGVGKTTVVLCLARTLLGPSFKDAVLELNASNDRGIDVVRNKIKMFAQQK
VTLPPGRQKIIILDEVDSMTEGAQQALRRTMEIYSNTTRFALACNYSEKVIEAIQSRCAI
LRYSKLTDAQILARIIQICQKENVEYTEDGLEAIVFTAQGDMRQALNNLQSTHNGFGVVN
SENVFKVCDEPHPLLIKEMLMHCIDANIRKAYKIMEHLWNLGYAAEDIIKNLFKVCKNLD
IHELLKLEFIKEIGVTHQRIVDGTISLLQMSGLLSRMCLHGKHFQGRK
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggagacaagtatggaaattgatgaagtaccccagtcacactcttcaaaatctagcatg
aatgcaaagataaaacatcacaacatcccttggattgaaaaatatcgtccggaaaaattt
gaagatatcgttgggaacgaggatacggttaggagattggcagtttttgctaaacaagga
aatgtaccaaatataattgttgctggccctccaggtgttggtaaaactacagtagtattg
tgtcttgcaaggacacttctgggaccctcatttaaggatgctgtattggaattaaatgcc
tcaaatgatagaggaatcgatgttgtaagaaataaaataaaaatgtttgcccagcagaaa
gtaacacttcctccaggacgacagaaaattattatattagatgaagttgatagtatgaca
gaaggggcacagcaggctttaagaaggacaatggaaatatatagcaacacaacaagattt
gctttagcctgcaattatagtgaaaaagttatcgaggctattcagtctcggtgtgcgata
ttaagatactcaaaattgactgatgctcaaattttagcaagaattatacagatatgccaa
aaggaaaatgtagagtacactgaagatggactggaagctatagtatttactgcccagggt
gatatgaggcaagcactaaataatttgcaatcaactcacaatgggtttggtgtagtaaac
tccgagaacgtattcaaagtttgtgatgagcctcatcctttattgatcaaggaaatgtta
atgcattgtatagatgcaaacatcaggaaagcttataaaataatggaacacttgtggaac
ttgggatatgcagctgaggatattatcaaaaatttgttcaaagtttgcaagaatttggac
atacatgaactgctgaagttagaattcattaaggagattggtgtaactcatcaaagaatt
gttgatggtactatcagtttgttacaaatgtctggacttctttcaagaatgtgcttacat
ggtaaacattttcaggggagaaaataa

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