Agrilus planipennis (emerald ash borer): 108737610
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Entry
108737610 CDS
T07419
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apln04121
]
108737610
Enzymes [BR:
apln01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108737610
Ubiquitin system [BR:
apln04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
108737610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
DUF3599
Motif
Other DBs
NCBI-GeneID:
108737610
NCBI-ProteinID:
XP_018326053
UniProt:
A0A1W4X0Y0
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MFYSLDVQKNTALEGILKLLEGCPTIYGLFWRSRNHLDSSTCYVSFKAYRKTDFEVNGTD
VSTFPHEDAVRAFLTAEEPIVVELKRRVLETNNSSTSTSSSLSCDTQTTPCSCLVSTAVQ
TDISGIAWMEDPSLESFTHDIDLEEVTLRKCSSDEKLGLTVCYSSGSEVDTYTEVYIREI
APHSVAERDGRLKQGDQILQVNGKDVSNKEETESLFAENNKAVTLLISRCMNQNEDEGDE
NQESPGNLPYQNSFIEQLLQQQQLESLQHSASNEPAPTIPPHSHMNLTNSLVRSKIDSIS
NEISKLDQRMQNIQLIRTERHKNIQLLPDSDTEHIYETIPESDLEPIYSYPYEPDQENIL
KKWLVTKGTDWPHPQARDCKERDAKIKDSQIRSKSSKSNSSEEHENSSSAYNTGGSSNSN
HLTFELGCYADPRQTETYRSTLILCSSADKKATMKTTEMFENCDTCKTQAVTQKKKTKAI
SSKNSPSSPTQRPPAHLLSDTMYTNIANLQQTMLLQQELFRQALGYQDISNKPTTSFTSP
SLSQYQFSHTQFAHKKLQTSATVDTKMEWKVKRRPDGTRYIARRPIRNRILKNRAIRISE
DRAGLTTEDDTISELKVGRYWTKEERKRHLEKSRERKQRQEILLASRYVENTEVRKNEKL
ASTSKKASCSADPTKKHKNKKGHKEGELTTVQDVLVHGPKMISNPNSKMIGLLSVTTV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcattagatgttcaaaaaaataccgcactggaaggaatactaaaattgctg
gaaggctgcccaacaatttatggtctgttttggcggagtagaaaccatcttgactccagt
acatgctacgtcagttttaaagcatatcgtaaaacagactttgaagtgaacggaaccgat
gtgagtacatttccacacgaggatgcagtccgggcatttttaacagccgaagaacccata
gttgtggaactaaagcgtagggtgttggaaacgaataactctagtacgagcacgagcagc
agtctatcatgtgatacccaaacaaccccatgctcgtgtctagtatcaactgctgtacag
acggatatttcgggcatagcatggatggaggatccgtctctcgaaagtttcactcacgac
attgacttggaagaagtaacattaaggaagtgtagtagcgacgaaaagttaggattaacg
gtatgttacagttccgggtccgaagttgatacctataccgaagtttatattcgggaaata
gcaccacatagtgtagcagaaagggatggaagattaaaacaaggagatcagatactccaa
gtcaatggcaaagatgtttcaaataaggaagaaactgaaagtttattcgctgaaaataat
aaagcagttacgcttttaataagccgatgtatgaatcagaacgaggatgaaggcgacgaa
aatcaagaatctccaggcaatttgccataccagaacagttttattgaacaacttcttcaa
caacagcaactcgaatctttacaacattccgcttcaaatgaaccagctccaactattcct
cctcactctcatatgaatctcacaaattccctagtacgatcaaaaatcgactcaatcagc
aatgaaatatcgaaacttgatcaacgtatgcaaaacatacaattaattagaacggaaagg
cataaaaatatacaactgttaccagattctgataccgaacacatttacgaaaccattcca
gagtccgatttagaaccaatttattcctacccttatgaaccagatcaagaaaatatacta
aagaaatggttagtaaccaaggggactgactggccgcatccacaggctcgggattgcaaa
gagagagatgccaaaataaaagatagtcaaattagaagtaaatcaagtaaaagtaacagc
agcgaagaacatgagaatagttctagtgcttataataccggaggatcgagtaatagtaac
catttaacgtttgaactcggttgttacgctgatcctcgacaaactgaaacttacaggtcg
acactaattctatgttcttcagcagacaaaaaagctaccatgaaaactacggaaatgttt
gaaaactgtgatacttgcaaaacgcaggctgtaacccaaaaaaagaaaaccaaagccatt
agttcaaagaatagtccctcttcaccaactcaacgacccccagcacatctattgtcagac
accatgtacactaatatagctaatcttcaacaaaccatgctgcttcagcaagagcttttt
agacaagctcttgggtatcaagacattagcaacaaaccaactactagctttacttcacct
agtctaagccaatatcaattttcacacacccaattcgcacataaaaagttacaaaccagc
gcaactgttgacacaaaaatggaatggaaagttaaaagaagacctgacggtaccaggtac
attgctcgaagaccgatccgcaatcgaattttaaagaacagagctattcgaatttcggaa
gacagagctggacttacaactgaagacgatacaatttcggaactgaaagtggggcgctat
tggacaaaagaggaaagaaaaaggcacctagaaaaatccagggaaagaaagcaaagacaa
gagattttactggcgtctagatatgtcgaaaatactgaagttcgaaaaaatgaaaaattg
gcatccacaagtaaaaaggcttcatgctcggcagaccccacgaaaaaacacaaaaacaag
aaagggcataaagaaggcgaactcacaactgttcaagatgtactagttcacggtccaaag
atgatctcaaacccaaatagcaaaatgataggattattgtctgttactacagtttag
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