KEGG   Agrilus planipennis (emerald ash borer): 108737739
Entry
108737739         CDS       T07419                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
apln  Agrilus planipennis (emerald ash borer)
Pathway
apln03030  DNA replication
apln03410  Base excision repair
apln03420  Nucleotide excision repair
apln03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:apln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108737739
   03410 Base excision repair
    108737739
   03420 Nucleotide excision repair
    108737739
   03430 Mismatch repair
    108737739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apln03032]
    108737739
   03400 DNA repair and recombination proteins [BR:apln03400]
    108737739
DNA replication proteins [BR:apln03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108737739
DNA repair and recombination proteins [BR:apln03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108737739
SSDB
Motif
Pfam: RFC1 AAA BRCT AAA_30 AAA_22 PTCB-BRCT RuvB_N AAA_14 AAA_17 Rad17 AAA_18 nSTAND3 Zeta_toxin AAA_5 RCF1-5-like_lid AAA_16 AAA_33 NTPase_1 SKI BRCT_2 RNA_helicase AAA_28 AAA_assoc_2 AAA_6 AAA_19
Other DBs
NCBI-GeneID: 108737739
NCBI-ProteinID: XP_018326325
UniProt: A0A1W4X1X5
LinkDB
Position
Unknown
AA seq 1018 aa
MPYDIRSYFNAAASKSKSAVKAKPKIPIEVSSDEDVISETPAKVKVKLTNLKKRKVILSD
SDSDRESKKNTKRSKTANDNPGIELKKVNVEDILGSTPVKQSEVKIKPKNEEEIAANVSQ
SKKTPKKKLKTEVGIHNDEDFEKSLLELDEDFLLNNVDELDKTIELEFNKTQEELTTGNL
KIDKDEKDIKTPGKRKKSPAKPKKSPFKNTHVETDQDRYDRKVHSAVSYQNYLHRGGPPH
HGSKELPKGKPDCLRNLCFLRTGVLDSLESYEFEELIKEHGGRVVHAVSKKVNYVVMGDV
PGPAKLEKARSYGIPIISEDDLLNLIQIKSGMKPTYTTSESEDLQNIEEEGQSSTKSPKE
DGSPKQLNKEKSDLPERKIVFKTLEKDHSTKESLIEEEVMKETTEADKFPKMKRCLTPKK
DHSDKEGSNEKLIKEEAYLDQNDDQIELSKASPEYETLLLTEKYKPLNAKVVVGQQGDHS
NLKKLMTWLQNWHTNNQHCQNKSRNVKATSRNEPGASFKAALLSGPPGVGKTTTATLVAK
ELGFDVVEFNASDTRNKKLLHEEVSQLLSTKTIAGFVKDGSQPTSKRVLLMDEVDGMAGN
EDRGGIQELVNLIKNTHIPIICMCNDRNHQKIRSLANYCFDLRFHRPRLEQIRAFLMTVC
FRENLNVSPNALNEIITGAGMDIRQCLNNLAMWVAGEKSLSVEIAKKEATLAKKDTILGP
WDVCKKIFNKRDHEMMSVTERGRLFFYDYSMAPLFVQENYLQIVPLNLRKRWILRASKTA
DSLSFADLLDKKIRSDNNWSLLEVESMFVAVIPGTYMGGQLGAQINFPSWLGKNSKRNKF
QRIATEIQAHMRTSTSASRLSFNLDYASHLRNRILEPLIKKGMDGIQEAIDIMHAYKLSR
DDLDGILELAHWHGSTDPSNQLNSKVKAAFTRQFKKEGVVLPYAATSASVKKRGVAYSED
LLNGEDEFVEDDDDEGEDDVTKDSNIKVKKATQKVVKKKDEASSSGTSKGGGKGKKKK
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgccatacgatatacgatcctactttaatgcagcggcatctaaatcaaagtcagcggta
aaggcaaaaccaaagataccaatagaagtctccagtgatgaagatgttatatctgaaaca
cctgcaaaagtcaaagttaaattaaccaatcttaaaaaacgaaaagtaatccttagcgat
tctgactcagatcgtgaaagtaaaaagaacacaaaaaggtctaagacagccaatgacaat
cctgggatagagttgaaaaaggtaaatgtagaagatatattaggtagtactcctgttaag
caatctgaggtcaaaataaaaccaaaaaatgaggaggaaattgctgctaatgtttctcaa
tctaaaaagacacccaagaaaaaattaaaaacagaagttggtattcataatgatgaagat
tttgagaagtctctgttggaacttgatgaagacttcttattgaataatgttgatgaactg
gacaaaacaattgagttagaattcaataaaactcaggaggaattaacaactggaaattta
aagatagacaaagatgagaaagatataaaaacacctgggaaaagaaagaaatcaccagct
aaaccaaaaaaatcccctttcaaaaatacccatgtggaaacagatcaagatcggtatgac
agaaaagtccattctgctgtctcgtatcaaaattatttgcatcgaggaggtcctccacat
catggcagtaaagaattaccaaaaggtaaaccagattgcttaagaaacttgtgcttccta
cgaacaggtgttttagactcattggaaagctacgaatttgaagaattgataaaagagcat
ggaggacgagttgtacatgcagtttcaaaaaaagtaaattatgttgttatgggtgacgta
ccaggccctgcaaaattggagaaggcaagaagttatggtattcccatcatatcagaggat
gaccttctgaacttaattcaaattaagtctggaatgaaacctacttacaccaccagtgaa
tcagaagatttacaaaacatagaagaagaaggacaaagtagtacaaagtctcccaaggaa
gacgggtctcctaaacagcttaataaagaaaaaagtgatttgccagagagaaaaatagta
tttaaaactcttgaaaaggaccattcaactaaggagtcattgattgaagaggaggtaatg
aaagaaacaactgaagcagataaatttccaaagatgaaacgatgtttaactcccaaaaaa
gaccattcagataaggaaggatcaaacgaaaaattaataaaagaagaagcttatctggac
caaaatgatgaccagattgagttatctaaagcctcacctgaatatgagacattactatta
acagaaaagtataagccactaaatgcaaaagttgttgttggccaacaaggagatcatagt
aatctaaagaaacttatgacatggctgcaaaattggcatacaaacaatcaacactgtcaa
aataaatctagaaatgtaaaagctacgagcaggaatgaaccgggggcttctttcaaagca
gccctattaagcggtcctccaggcgttggtaaaaccaccacagcaaccttagttgcgaag
gaattgggctttgatgttgttgaatttaatgcatcagatacaagaaataaaaagttgtta
catgaagaagtctcccagttgctcagtacaaaaacaatagctggttttgttaaagatggt
tctcagccaacatcaaaaagagtactgttaatggacgaagtggatggaatggccggcaat
gaggacaggggaggaatacaagaactcgtaaatttgattaaaaacacccatatccctata
atttgcatgtgtaatgaccgcaaccaccaaaaaattcgatctttggccaattattgcttc
gacctgagattccatagacccagattggaacaaataagggcatttcttatgacagtgtgc
tttagagaaaacttaaatgtttccccaaatgctttgaatgaaataataactggggctgga
atggatataagacagtgtctgaataatttggcaatgtgggttgcaggagaaaaaagtttg
tcagtagaaatagcaaaaaaagaagcaacccttgccaaaaaagacacgattttgggtcca
tgggatgtttgtaaaaaaatatttaataaaagagatcatgaaatgatgtcagttacagag
agaggcagattatttttttacgactatagtatggcgcctctttttgtacaagaaaattac
cttcaaatagttccacttaacctaaggaaaaggtggatactaagggcgtcaaaaacagca
gattcgttaagttttgcggatcttcttgacaagaaaattagaagtgataacaactggtca
ctacttgaagtagagtcgatgtttgttgctgtcattccaggtacttatatgggaggacaa
ttaggggctcaaataaattttccgagttggctaggaaaaaattccaaacgaaataaattt
caaagaattgcaactgaaatccaagcgcatatgcggacaagtacatctgcttctcgtttg
tcttttaatttggattatgcttcccacttaaggaatagaatccttgaaccactgataaaa
aaggggatggatggtattcaggaagcaatagacatcatgcatgcttataagctttcgagg
gatgatttggatggaattttggaattggctcattggcatggaagtacagacccttcaaac
cagttgaactcaaaagtgaaagccgcttttacaaggcaatttaaaaaggaaggtgttgta
cttccttatgctgcaacttctgcaagtgttaaaaaaaggggagtagcatattctgaagat
ttactgaatggtgaggacgaatttgtggaagatgatgacgatgaaggcgaagatgatgtt
actaaggattcaaatattaaagtgaagaaggcgacccaaaaagttgttaaaaagaaagat
gaagcatcaagcagcggcactagcaagggcggtggaaaagggaaaaagaaaaaatga

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