Agrilus planipennis (emerald ash borer): 108737739
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Entry
108737739 CDS
T07419
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03030
DNA replication
apln03410
Base excision repair
apln03420
Nucleotide excision repair
apln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108737739
03410 Base excision repair
108737739
03420 Nucleotide excision repair
108737739
03430 Mismatch repair
108737739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apln03032
]
108737739
03400 DNA repair and recombination proteins [BR:
apln03400
]
108737739
DNA replication proteins [BR:
apln03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108737739
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108737739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_30
AAA_22
PTCB-BRCT
RuvB_N
AAA_14
AAA_17
Rad17
AAA_18
nSTAND3
Zeta_toxin
AAA_5
RCF1-5-like_lid
AAA_16
AAA_33
NTPase_1
SKI
BRCT_2
RNA_helicase
AAA_28
AAA_assoc_2
AAA_6
AAA_19
Motif
Other DBs
NCBI-GeneID:
108737739
NCBI-ProteinID:
XP_018326325
UniProt:
A0A1W4X1X5
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MPYDIRSYFNAAASKSKSAVKAKPKIPIEVSSDEDVISETPAKVKVKLTNLKKRKVILSD
SDSDRESKKNTKRSKTANDNPGIELKKVNVEDILGSTPVKQSEVKIKPKNEEEIAANVSQ
SKKTPKKKLKTEVGIHNDEDFEKSLLELDEDFLLNNVDELDKTIELEFNKTQEELTTGNL
KIDKDEKDIKTPGKRKKSPAKPKKSPFKNTHVETDQDRYDRKVHSAVSYQNYLHRGGPPH
HGSKELPKGKPDCLRNLCFLRTGVLDSLESYEFEELIKEHGGRVVHAVSKKVNYVVMGDV
PGPAKLEKARSYGIPIISEDDLLNLIQIKSGMKPTYTTSESEDLQNIEEEGQSSTKSPKE
DGSPKQLNKEKSDLPERKIVFKTLEKDHSTKESLIEEEVMKETTEADKFPKMKRCLTPKK
DHSDKEGSNEKLIKEEAYLDQNDDQIELSKASPEYETLLLTEKYKPLNAKVVVGQQGDHS
NLKKLMTWLQNWHTNNQHCQNKSRNVKATSRNEPGASFKAALLSGPPGVGKTTTATLVAK
ELGFDVVEFNASDTRNKKLLHEEVSQLLSTKTIAGFVKDGSQPTSKRVLLMDEVDGMAGN
EDRGGIQELVNLIKNTHIPIICMCNDRNHQKIRSLANYCFDLRFHRPRLEQIRAFLMTVC
FRENLNVSPNALNEIITGAGMDIRQCLNNLAMWVAGEKSLSVEIAKKEATLAKKDTILGP
WDVCKKIFNKRDHEMMSVTERGRLFFYDYSMAPLFVQENYLQIVPLNLRKRWILRASKTA
DSLSFADLLDKKIRSDNNWSLLEVESMFVAVIPGTYMGGQLGAQINFPSWLGKNSKRNKF
QRIATEIQAHMRTSTSASRLSFNLDYASHLRNRILEPLIKKGMDGIQEAIDIMHAYKLSR
DDLDGILELAHWHGSTDPSNQLNSKVKAAFTRQFKKEGVVLPYAATSASVKKRGVAYSED
LLNGEDEFVEDDDDEGEDDVTKDSNIKVKKATQKVVKKKDEASSSGTSKGGGKGKKKK
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgatatacgatcctactttaatgcagcggcatctaaatcaaagtcagcggta
aaggcaaaaccaaagataccaatagaagtctccagtgatgaagatgttatatctgaaaca
cctgcaaaagtcaaagttaaattaaccaatcttaaaaaacgaaaagtaatccttagcgat
tctgactcagatcgtgaaagtaaaaagaacacaaaaaggtctaagacagccaatgacaat
cctgggatagagttgaaaaaggtaaatgtagaagatatattaggtagtactcctgttaag
caatctgaggtcaaaataaaaccaaaaaatgaggaggaaattgctgctaatgtttctcaa
tctaaaaagacacccaagaaaaaattaaaaacagaagttggtattcataatgatgaagat
tttgagaagtctctgttggaacttgatgaagacttcttattgaataatgttgatgaactg
gacaaaacaattgagttagaattcaataaaactcaggaggaattaacaactggaaattta
aagatagacaaagatgagaaagatataaaaacacctgggaaaagaaagaaatcaccagct
aaaccaaaaaaatcccctttcaaaaatacccatgtggaaacagatcaagatcggtatgac
agaaaagtccattctgctgtctcgtatcaaaattatttgcatcgaggaggtcctccacat
catggcagtaaagaattaccaaaaggtaaaccagattgcttaagaaacttgtgcttccta
cgaacaggtgttttagactcattggaaagctacgaatttgaagaattgataaaagagcat
ggaggacgagttgtacatgcagtttcaaaaaaagtaaattatgttgttatgggtgacgta
ccaggccctgcaaaattggagaaggcaagaagttatggtattcccatcatatcagaggat
gaccttctgaacttaattcaaattaagtctggaatgaaacctacttacaccaccagtgaa
tcagaagatttacaaaacatagaagaagaaggacaaagtagtacaaagtctcccaaggaa
gacgggtctcctaaacagcttaataaagaaaaaagtgatttgccagagagaaaaatagta
tttaaaactcttgaaaaggaccattcaactaaggagtcattgattgaagaggaggtaatg
aaagaaacaactgaagcagataaatttccaaagatgaaacgatgtttaactcccaaaaaa
gaccattcagataaggaaggatcaaacgaaaaattaataaaagaagaagcttatctggac
caaaatgatgaccagattgagttatctaaagcctcacctgaatatgagacattactatta
acagaaaagtataagccactaaatgcaaaagttgttgttggccaacaaggagatcatagt
aatctaaagaaacttatgacatggctgcaaaattggcatacaaacaatcaacactgtcaa
aataaatctagaaatgtaaaagctacgagcaggaatgaaccgggggcttctttcaaagca
gccctattaagcggtcctccaggcgttggtaaaaccaccacagcaaccttagttgcgaag
gaattgggctttgatgttgttgaatttaatgcatcagatacaagaaataaaaagttgtta
catgaagaagtctcccagttgctcagtacaaaaacaatagctggttttgttaaagatggt
tctcagccaacatcaaaaagagtactgttaatggacgaagtggatggaatggccggcaat
gaggacaggggaggaatacaagaactcgtaaatttgattaaaaacacccatatccctata
atttgcatgtgtaatgaccgcaaccaccaaaaaattcgatctttggccaattattgcttc
gacctgagattccatagacccagattggaacaaataagggcatttcttatgacagtgtgc
tttagagaaaacttaaatgtttccccaaatgctttgaatgaaataataactggggctgga
atggatataagacagtgtctgaataatttggcaatgtgggttgcaggagaaaaaagtttg
tcagtagaaatagcaaaaaaagaagcaacccttgccaaaaaagacacgattttgggtcca
tgggatgtttgtaaaaaaatatttaataaaagagatcatgaaatgatgtcagttacagag
agaggcagattatttttttacgactatagtatggcgcctctttttgtacaagaaaattac
cttcaaatagttccacttaacctaaggaaaaggtggatactaagggcgtcaaaaacagca
gattcgttaagttttgcggatcttcttgacaagaaaattagaagtgataacaactggtca
ctacttgaagtagagtcgatgtttgttgctgtcattccaggtacttatatgggaggacaa
ttaggggctcaaataaattttccgagttggctaggaaaaaattccaaacgaaataaattt
caaagaattgcaactgaaatccaagcgcatatgcggacaagtacatctgcttctcgtttg
tcttttaatttggattatgcttcccacttaaggaatagaatccttgaaccactgataaaa
aaggggatggatggtattcaggaagcaatagacatcatgcatgcttataagctttcgagg
gatgatttggatggaattttggaattggctcattggcatggaagtacagacccttcaaac
cagttgaactcaaaagtgaaagccgcttttacaaggcaatttaaaaaggaaggtgttgta
cttccttatgctgcaacttctgcaagtgttaaaaaaaggggagtagcatattctgaagat
ttactgaatggtgaggacgaatttgtggaagatgatgacgatgaaggcgaagatgatgtt
actaaggattcaaatattaaagtgaagaaggcgacccaaaaagttgttaaaaagaaagat
gaagcatcaagcagcggcactagcaagggcggtggaaaagggaaaaagaaaaaatga
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