Agrilus planipennis (emerald ash borer): 108737824
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Entry
108737824 CDS
T07419
Name
(RefSeq) probable ribonuclease ZC3H12D isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108737824
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108737824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_4
Lipoprotein_21
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
108737824
NCBI-ProteinID:
XP_018326433
UniProt:
A0A1W4X212
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MSSSSVGTVIIKTSCTQLLKDNFDRISVLYSAQLSEKVAQGRESEGITRFDVFLAVPGTQ
DRKPSPDFVTRLQKYVDEICREGCSGVVTGEDSSYDSDYEAEPLANHQDVSRTTSDTLAA
EYSDYVQTAPEHTPGYTARVEFALKLGYTEKLVQAALLKLGPSPAQNELLAELIKLGAQR
SSSSCDSSPTDGPTDIAAEFQSDLSTATGQVLRPIVIDGSNVAMSHGNKELFSCRGIKIA
VDWFKARGHKDITVFVPKWRKEAPRPDNPVRDQEILAELEKERMLVFTPSRFVGGKRMVC
YDDRYILKLAAEVDGVVVSNDNYRDLSQENAEFRKVVEERILMYSFVNDRFMPPDDPLGR
SGPTLDNFLRCQPKKSEPPPPCPYAKKCTYGNKCKYHHPERGPLPHKSVTERLSEHAQRH
LQAREGETRKIPLGRTRSNVPPPKETTQHAVVSKSRSVDNVGGTYPPPPAASGTENLHKK
LQRQLTLNPNSDPRLVRARFLPPLQHGGAGALPQQLRPYLTPGHPNWELHQHVTRIASAP
DSYRAWPPNSATAAHAQHAAAAHMQRVSSCSDPQLNVWPHHWPHAAGGAAAHPNIQEDVR
RKLHYHLSAIFPEEQVSQAMQMYPDETNPQKICAAILAMFPSK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcgagtgtcggcacggttattataaaaacttcgtgtacacagttgctcaaa
gataatttcgaccgaatttccgtgttatattccgctcagttaagtgaaaaagttgcccag
ggacgagaaagtgaaggaatcaccagattcgacgtgtttctggcggtccccggaactcag
gatagaaaaccaagtcccgacttcgtaaccaggttacagaaatatgtggatgaaatatgt
cgagaaggttgttcgggggtggtaacgggtgaagattcaagctacgattccgattatgaa
gcagaacctttggcgaaccaccaagatgtgtccaggacgactagcgatactctcgcagcc
gaatattctgactatgtccaaaccgcccccgaacacaccccaggatatacagctagagtg
gagtttgcgttaaaactgggttacacggagaagcttgttcaagcagcccttttaaaatta
ggcccgtcacctgctcagaatgaacttctggccgaattgataaaattgggtgcccagagg
agcagttcttcttgcgatagcagcccaacagatggacccaccgatatagcagccgagttt
caaagcgacctttctactgctaccggacaagtgctgaggccgattgttatcgatggaagt
aacgttgcaatgagtcatggaaacaaagaactattttcgtgtcgtggtattaagatcgcg
gtagactggtttaaggcacgaggacacaaagacataacggtgttcgttccaaaatggcga
aaagaagccccgagacccgacaatcccgtccgcgaccaggagatcctcgctgaactcgaa
aaagaacgtatgctggtctttaccccctcccggttcgtcggaggtaagaggatggtgtgt
tacgacgatcgatatattctcaaactagccgcagaggtcgatggggtggttgtcagtaac
gataactaccgcgacttgtcccaagaaaatgcagagtttcgcaaagtagtagaagaacgc
atcctaatgtattcttttgttaacgatcgattcatgcctcctgacgacccccttggacgt
tctggaccaacactggacaatttccttcgttgccaaccgaagaaaagcgaaccgccaccg
ccgtgtccctacgcgaaaaagtgtacgtatggtaacaagtgcaagtaccatcatccagaa
cggggtccattaccgcacaagagcgtgacggagagactaagtgagcatgcgcagcgtcat
ttgcaagctcgtgaaggggagacacgtaagattcctctcggtcgcacgcgatctaacgtg
cctccccccaaagaaaccactcaacatgcggtcgtttcaaaaagtcgtagtgtcgataat
gtgggtggtacgtatccgccacctccggctgcttccgggaccgagaatcttcataagaaa
ctacaaagacaattaacgctcaatccaaactctgacccgcggctcgtacgagctcgtttc
ctccctccactgcaacacggtggtgctggtgcgttaccgcaacaattacgtccctattta
acccccggacaccccaattgggaattgcatcaacacgtaacgcgtattgcctccgcacct
gattcgtaccgcgcttggccccccaattcagctacagctgcgcatgcgcaacatgcagca
gctgcacatatgcaacgtgtgtctagctgttcagacccacagctgaacgtgtggccccat
cattggccgcatgctgcaggtggagcagctgcgcatcctaacatacaggaggacgttagg
agaaaattacactatcatctgagcgccatttttccagaggaacaagtatcgcaggcgatg
caaatgtatccggatgagacgaacccccagaagatctgtgcagctattttggctatgttc
ccgtcaaaataa
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