Agrilus planipennis (emerald ash borer): 108737845
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Entry
108737845 CDS
T07419
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03022
Basal transcription factors
apln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108737845
09124 Replication and repair
03420 Nucleotide excision repair
108737845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apln03021
]
108737845
03400 DNA repair and recombination proteins [BR:
apln03400
]
108737845
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108737845
Transcription machinery [BR:
apln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108737845
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108737845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
TniB
Motif
Other DBs
NCBI-GeneID:
108737845
NCBI-ProteinID:
XP_025835845
UniProt:
A0A7F5RJ05
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MAPTKRFYSKNEGKPKKRKKDDEEEWAMEDDDSNDVEGAVVPGAAGRNAENNDQGVQEDE
FGAKDYRSQMILKSDHNSRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCRPEFIHE
YKLTAYSLYAAVSVGLQTHDIIEYLKRLSKTSVPEGIVEFIKLCTLSYGKVKLVLKHNKY
FVESPYPEVLQKLLKDPVIQECRLRRNAENESDVDGLITQIQDKKSIPTFGTKPSTSDQS
TESTTVVPDDITNFYEKMDNEEDDEEEAALNTVSFEVNQEKIEVLQKRCIELEHPLLAEY
DFRNDTVNPDINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACC
TVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCSILVTTYSMITH
TQRRSWEAEQTMKWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLLREDD
KIADLNFLIGPKLYEANWLELQKRGFIARVQCAEVWCPMTPEFYREYLVCKTSKRLLLYV
MNPHKFRACQYLIRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPTTQSERIQILQN
FKFNPKVNTIFVSKVADTSFDLPEANVLVQISSHGGSRRQEAQRLGRILRAKKGAIAEEY
NAFFYTLVSQDTMEMNYSRKRQRFLINQGYSYKVITKLAGMEEEPDLMYKTREEQGQLLQ
QVLAASDIDCEDEKIPGEGGPRGGSSATRRAGHLSSMSGADDAVYYEYKKSASSSTAVKH
PLFKKFRH
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcacctacaaaacgtttttactcaaagaacgaaggtaaacctaagaaaagaaaaaaa
gacgatgaagaagaatgggcaatggaagacgacgattctaacgatgtagaaggagctgtt
gtaccaggggctgcaggtcgtaatgccgaaaataatgatcaaggcgttcaagaagatgaa
tttggagccaaagattataggtcgcaaatgatattgaaatccgatcacaattctcgtcct
ttatgggttgctcctaatggacatatatttcttgaatcattttcccctgtttataaacat
gcccatgattttttgatagccatatcagaacctgtatgcaggccagaatttattcatgaa
tacaaacttactgcatattctttgtatgctgctgttagtgttggacttcagactcatgac
attattgaatatttaaaaagattaagcaaaacaagcgtacctgaaggcatagtggaattt
attaaactgtgcactttatcttatggaaaggttaagcttgtattgaaacataataagtat
tttgttgagagtccttacccagaggtgctgcagaaattgttaaaagatcccgtgatacaa
gaatgtcgattgagaagaaatgcagaaaatgagtccgatgtagatggtttaattacacaa
atccaagacaagaaaagcattccaacttttgggacaaaacctagtacttctgaccagagc
acggagagtaccactgtagtaccagatgatatcacaaatttttacgaaaaaatggataat
gaggaagacgacgaagaagaggcggctttaaatactgtttctttcgaagtgaaccaggaa
aaaattgaagtcttacaaaaacgctgtattgaacttgaacatcctcttttagctgaatat
gattttcgaaacgacacagtcaatccggacattaacattgatttaaaaccatcagcagta
ttacgtccttaccaggaaaaaagtctacgcaaaatgttcggtaatggtcgtgcaagatct
ggtgtaatcgtcttaccatgtggtgccggtaaatcattagtaggcgtaacggcctgttgt
accgtacgcaaaagggctcttgtgttatgtaattcaggcgtttccgtcgaacaatggaaa
caacaattcaaaatgtggtcaacagcggacgatagtatgatttgtcgttttacttctgaa
gctaaagacaagccgatgggctgcagcatcttggtcaccacgtattccatgattacccat
acgcaaagacgttcatgggaagcagaacaaacgatgaagtggcttcaagaacaagaatgg
gggattatggtcttagatgaagtccacactattccagccaaaatgtttagaagagtttta
accatcgtccagtcccattgcaaacttggtcttacagcaactttacttagagaagatgac
aaaattgcagatcttaattttctcattggaccgaaattgtatgaagcaaattggttggaa
cttcaaaaaagagggttcattgctagagtccagtgcgctgaagtgtggtgtcccatgact
cccgaattctatcgcgagtatctcgtttgtaaaacgagcaaaaggcttttgctatatgtg
atgaacccccacaagtttcgggcatgccaatacctgattcgataccacgaaagaagagga
gacaagaccattgtcttctctgataacgtatttgctttaaagcattacgcaattaaaatg
aacaagccttacatttatggtcccaccactcaaagtgaacggattcaaattttacaaaac
ttcaaattcaatccgaaagtcaacactatctttgtcagtaaagtggctgacacttctttt
gatttaccagaagctaacgtcttggtacagatctcgtcccatggtgggtccaggaggcag
gaagcgcaacgtttggggcgtattcttcgagctaaaaaaggagccattgctgaagaatac
aacgctttcttttataccctcgtttctcaagacaccatggagatgaattattcaagaaaa
cgacaaaggtttttgataaatcaaggatacagttataaagtaattacaaagcttgctggc
atggaagaggaaccggacttaatgtacaaaacaagggaagaacagggacaactgttacaa
caagtactagctgcaagtgatattgattgcgaagacgagaaaattcccggcgaagggggc
ccaagaggaggaagcagtgccacaaggagggccggccatttaagctccatgtctggagca
gatgatgctgtttattacgaatacaaaaagagtgcatcgtcttcaacagcagtgaagcat
cctctctttaaaaagttcagacattaa
DBGET
integrated database retrieval system
