Agrilus planipennis (emerald ash borer): 108738244
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Entry
108738244 CDS
T07419
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108738244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
JAG1-like_EGF2
DUF5490
EzrA
ATG17_like
Motif
Other DBs
NCBI-GeneID:
108738244
NCBI-ProteinID:
XP_025834665
UniProt:
A0A7F5RFH5
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MEGCLSLAKSLLLYFGLITLIKSVLNQHLVNEYVGGAARARNWGNINKGYVPVEPHPCEQ
SSCYPATGNLLIGREKQLSASSTCGLYEQQRYCIVSHLEDRKKCFWCDSRPSKIMKPHLN
HSIQNVVYRYYPGTKLKSWWQSENGKENVSIQLDLEKEFHFTHLIMTFKTFRPAAMYIER
SYDFGKTWKVYRYFAHKCADSFPGIPERYSQNLTDVICESRYSNVAPSTNGELIFRVLPP
NMHIDNPYSEEVQNLLKVTNLRIRFVKLHTLGDDLLDPREEIQEKYYYAVTDMVVRGSCS
CYGHANRCLPLPGMETKPDMVHGRCECTHNTKGSNCEECEDFFNDLPWRPAIGKQTNACK
RCNCNNHATSCHFDPAVYEQTGRISGGVCDGCRHNTMGPNCEQCKPFYYRDPLRDIQDPE
VCRPCDCDPVGSTDAGACDSTTDPINGLEAGKCHCKTNVEGRRCDYCKNGFWNFTSDNPD
GCQPCTCDILGTIGNQGCNAYSGECTCKRYVKGRNCDQCLPEYWGLSDKRDGCQACDCDP
GGSYDNNCDVITGQCKCREHMTGRQCDIAQQQHFTASLDFLLYEAELAQGSATCQVVIRE
PYRDGRPPSWTGTGFMKAPEGSYIEFQITNIKTSMDYDIAIRYEPTLPENWNDVTLTVIR
PDPIDPQGPCASTHPSDDTKRVSLPSNSRSAIAFPPTCLEAGKSYIVRIDFNNYKYGTST
PSASILVDSIVLVPRIEKIPWFQGSVPAEARRREYEEHRCDIALENPNIPLSEVCKQHHK
SIGAYIFNGAFSCQCDPTGSTSKLCNDHGGACSCKLNVVGRRCDRCAPGTYGFGPEGCKA
CDCNSIGALNNFCNVTTGQCKCRSNTYGRECDQCRTGFWNFPNCERCDCNGHADICDSRT
GVCIDCKDHTEGHHCDYCKEGFYGDPRIGFDIPCRPCPCPGFKEAFHSFADRCILDSQTK
DVVCECKEGYAGSKCDVCADNYYGNPEIPGGSCQLCDCSNKIDPLVPGNCDPHTGKCLRC
LYDTTGDHCEICRDGFFRLSIDDNCQPCTCQFLGTNETAGPCDRETGQCKCLPNVIGKDC
DKCEKNHWKIASGKGCEPCDCDPLGSMNPQCNEYEGQCLCKENFGGRQCNECRENYWGNP
REDKCIECLCNPEGSKTPQCDRKTGNCVCREGIGGRSCDECARGYLGTAPYCSPCGECFD
NWDRILKEHENKTLHIIERGKNIKKIGATGAYTKEFDEMQNQLDEIEQLLNSTTNIDIDQ
IEDKINNLANQIQDAKGESPDELLNNVTKDIKLSEIKLNELRKDMEKLVAQTQELRNNGT
TLQEADVQGALNLVRMAKDKAATAAHKAEHTQSIVDYAERQCKAAENLVNVTEAEFKRMQ
QENEQALDRIKENITNLNNMIPELNKLVCDGTSNSPDDSCDSICGGAGCGSCGESVSCQD
GAKQQALFALSYANDTEKTLKEKEEAAEKFFRNISQLNTTQAKNSAQETLDKANKLYSNF
NNSLQAVNNIKKQIDDFINQNNSTPDEIRQLAEKVLKKDINLTKEEIQTLQKKIQEALET
LTNPDKIILETRDDLQRVHKLKEDADNAKAKSSDILKTAEGIKEALLNSSVAQNDADEAI
TDANKNIDTVHELLTKIGAIAEEAHNKTQETSGNIKDLSRNLTDLQNNMRNNERFAQRVI
EEAAKVHQEANHTNKTANELLNRYDNIKYMLSNTSRVIEDSKVKANELSERAYNITHKIE
STESEIKQLISSSSDQLLKNLENEIDQLINRMHAYSAVIEERHNHYKSCT
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtgcttatctttggcaaaaagtttacttttatactttggattaattacatta
attaagtccgttttaaatcaacatttagtcaatgaatatgttggtggggcagcaagagca
cgaaattgggggaacattaataaaggatatgtccctgtagaaccccatccatgtgagcaa
agttcgtgttacccagccacaggtaatttacttataggtagagagaaacaacttagcgcg
tcttcaacttgcggtctttatgagcaacaacgatattgtattgtgtctcacttggaagac
cgaaagaaatgcttttggtgcgattcacgtccatccaaaatcatgaaaccacatttaaac
cacagtatacaaaacgttgtttatagatactacccaggaacaaaactaaagtcgtggtgg
cagtcagaaaatggcaaagaaaatgtttcgattcaacttgatctagaaaaggagtttcac
tttacccatttaattatgacttttaaaacgtttagaccagcagctatgtacatagaaagg
tcttacgacttcggaaaaacatggaaggtatatcggtattttgcgcataaatgtgcggac
agttttccaggaattccagaaagatattcgcaaaatctaacagacgttatttgcgaatcc
cgatattcaaatgtggcaccctcgacaaacggagaacttatttttagagttcttccacct
aatatgcatatcgacaatccctattccgaagaagttcaaaacttactaaaagttactaat
cttcggatccgatttgtaaaactccatactctaggtgacgatttgctggatccacgcgaa
gaaatacaggaaaagtactactacgcagtaaccgatatggtagtacggggttcctgttct
tgttacggtcatgccaaccgctgtttgcccttaccgggaatggaaactaaaccggacatg
gtacatggtagatgcgagtgtactcataacacaaaaggatcaaattgcgaagaatgcgaa
gactttttcaacgatctaccctggagacctgccattggaaagcaaacaaatgcctgcaaa
aggtgtaactgtaataaccatgcaacgagttgccactttgatcctgcggtttatgaacaa
actggtagaataagtggaggagtttgtgacggttgtcgtcacaacacgatgggccccaac
tgcgaacagtgcaaaccattctactacagggaccccttaagagacatccaagacccagaa
gtgtgcagaccttgcgattgtgatcctgtggggtcgacggatgcgggtgcgtgtgactcc
accacggaccctataaacggactagaagctggtaaatgtcattgtaaaacgaacgtcgaa
ggtcgacgttgcgactactgtaaaaacggattttggaactttacatccgacaatcccgat
ggttgtcaaccgtgcacgtgcgacattttgggaacaataggtaatcaaggatgtaacgcg
tattcaggagagtgtacttgcaaaagatatgtaaagggaagaaactgtgaccagtgtttg
ccagaatattggggactttctgataaacgggacggttgccaggcgtgcgattgcgatcct
ggtggttcgtacgataacaactgcgatgttataactggtcagtgtaaatgtagggaacac
atgacgggacgtcagtgcgacattgcacaacagcaacacttcacagcttctctggacttc
ctgctatacgaagccgaattagcccaaggatctgctacatgccaggtggttattcgtgaa
ccatacagagacggcagacctccgtcatggactggtacaggatttatgaaagcgcctgaa
ggatcttatatagaattccaaataaccaacattaaaacgtccatggattacgatatcgca
ataaggtatgagccaacccttcccgaaaattggaacgatgtgacccttacggtaatacga
ccggatccgatagatccccaaggtccttgtgcgtctacacatccttcagatgacactaaa
agggtttctttgccttctaattcacgcagcgcaattgcgttcccaccaacgtgtttggaa
gccgggaagtcgtacatagttcgaattgatttcaacaattacaaatacggcacctcaaca
ccttcggcgtcaattctcgttgattctattgttcttgtacctcgaattgaaaaaatcccc
tggttccaaggatcagtgccagctgaagcacgtaggcgagaatatgaagaacatcgttgt
gacatcgctttagaaaaccccaacatacccctttcggaggtgtgcaaacagcatcataag
agtattggagcgtacatcttcaatggagcattttcttgtcaatgtgacccaactggatct
accagcaaattgtgtaacgatcatggaggagcttgtagctgcaaactgaacgttgtggga
agacgttgtgatcgttgcgcgccaggaacttacggttttggtcccgaaggatgtaaagct
tgtgactgtaacagtattggtgctctaaataacttttgcaatgtcacaaccggtcaatgt
aaatgtagatcgaatacttatgggcgcgagtgtgatcaatgccgtacaggattctggaat
ttccctaattgcgaacgatgcgactgcaatgggcatgcagatatatgcgattctaggacc
ggagtttgtatagactgtaaagaccataccgaaggacatcattgcgattattgtaaagaa
ggattttatggcgatccgaggatcggattcgacattccttgcagaccctgtccttgccct
gggtttaaagaggcattccactcctttgctgacaggtgtatattagattcacagaccaaa
gatgtggtttgtgaatgcaaggaaggttacgcaggatcaaagtgtgacgtctgcgccgat
aattattacggaaatcctgagattccgggcggttcgtgtcaactttgcgactgtagcaat
aaaattgatcctctagtccctggtaattgcgatcctcatacaggaaaatgtcttagatgc
ctttatgatactaccggtgatcactgcgagatttgtcgagatggattcttcaggctttca
atcgacgataactgccaaccctgcacatgtcaatttttgggtaccaatgaaactgctggt
ccttgtgatcgggaaactggtcaatgtaaatgtctaccaaatgttatcggcaaggattgc
gataaatgcgaaaagaaccactggaagattgctagtggtaaaggctgtgaaccttgcgac
tgcgatcctttgggttccatgaatcctcagtgtaatgaatatgaaggtcaatgtttgtgt
aaggagaactttggaggaagacagtgtaatgagtgcagagaaaactattggggaaatcct
agagaagacaaatgtatcgaatgtctttgtaatccagagggatcaaaaacgcctcaatgt
gacagaaaaactggtaactgtgtttgtcgtgaaggaattggaggacgatcttgtgacgaa
tgcgctaggggatatttgggtaccgcaccctattgttcgccttgcggcgaatgtttcgac
aactgggaccgtattttgaaggaacacgaaaataaaacattgcatattattgaaagggga
aagaacattaaaaaaattggggcaactggagcgtataccaaagaatttgacgaaatgcaa
aatcaactggacgaaattgaacaacttcttaacagtaccacaaacatagacatcgatcag
atagaagacaaaattaacaatctagcaaatcaaattcaagacgcgaaaggggaaagtccc
gatgaactcctgaacaatgtcacaaaagacattaagctttctgaaataaaattgaatgaa
ttaaggaaagacatggaaaaattagttgctcaaacccaagaattaaggaataatggtacc
acacttcaagaagcagatgtccaaggggctttaaatttagttcgtatggctaaagataaa
gccgcaacagcagcacacaaggctgaacacacacagtcgatagtggattatgcggaaaga
caatgtaaagcagcagagaacttggtaaatgtaacagaagcagaattcaaaagaatgcaa
caggaaaacgaacaagcacttgatagaattaaagaaaatataacaaatttaaataatatg
ataccggaattaaataaacttgtatgtgatggtaccagcaacagtcctgatgattcgtgc
gactccatatgtgggggtgctggatgtggcagttgtggcgaaagtgtttcttgtcaggat
ggcgcaaaacaacaagctttgttcgctctcagctatgcaaatgacacagaaaagacgtta
aaggaaaaggaagaagcagccgaaaagtttttccgaaatataagccaattgaacaccacg
caagctaagaattcggcccaagagactctcgataaagcaaataaattatattccaatttc
aataattcactacaagctgtaaataatataaagaaacagattgacgattttattaatcaa
aacaattctactcctgacgagataagacaactagccgaaaaggtccttaaaaaagacatc
aatttaacaaaagaagaaattcaaactcttcaaaagaaaattcaggaagctcttgaaaca
ttaacgaatccagataagattatattagaaacaagggatgacttacaaagagttcacaaa
ttaaaggaagatgccgataacgcaaaagctaagtcaagcgacattttaaaaactgcagaa
ggaattaaagaagctttgctgaacagtagcgttgcgcaaaatgatgcagatgaagcaata
acagacgcaaataaaaatattgacacagttcacgaactattaacaaagattggtgctatc
gccgaagaagctcacaataagacacaagaaaccagtggcaatataaaagatctttcgcga
aaccttacagatcttcaaaataacatgagaaataacgaaagattcgcccaacgtgttatc
gaggaggctgccaaagtacatcaagaggcgaatcacacaaacaaaacggctaatgagctt
cttaataggtatgataatattaaatacatgttatcaaacacttctagggttattgaagat
tcaaaagtgaaggctaatgagctgtctgagagagcctacaatataacacataaaattgaa
tcgacagagtctgaaattaaacagctaattagtagctcgtctgatcagttattaaagaat
ctagaaaacgagatcgatcaacttattaatcgaatgcatgcctatagtgccgtaattgaa
gaaaggcacaatcattacaagtcgtgcacttag
DBGET
integrated database retrieval system