Agrilus planipennis (emerald ash borer): 108738522
Help
Entry
108738522 CDS
T07419
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03420
Nucleotide excision repair
apln04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108738522
09124 Replication and repair
03420 Nucleotide excision repair
108738522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apln04121
]
108738522
03400 DNA repair and recombination proteins [BR:
apln03400
]
108738522
Ubiquitin system [BR:
apln04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
108738522
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108738522
TCR (transcription coupled repair) factors
Cul4-CSA complex
108738522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
108738522
NCBI-ProteinID:
XP_018327485
UniProt:
A0A1W4X581
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MAYHYVVTAHKPTAVTACVTGNFTSPNDLNLIVAKTTRLEIYLVTPEGLRPVKEVGIYGK
IVVLKLFRPQNEKKDLLFIVTMKYNAMILECINDGENLEIITKAHGNVADRIGKPADTGI
IAVIDPKARVIGLRLYDGLFKIIPLDKENNELKASNIRMDELQVQDVEFLHGCANPTIVL
IHQDLNGRHVKTHEISLRDKEFVKIPWRQDNVETEASMIIPVPSPLCGAIVIGQESILYH
DGITSVAVAPPIIKQSTIVCYARVDPGGLRYLLGDMAGHLFMLFLDVESRGDGADVVKDL
KVELLGEIATPECITYLDNGVIFIGSRLGDSQLVKLNTKADDNGSYVTLMESFTNLAPIV
DMCVVDLERQGQGQLVTCSGAYKDGSLRIIRNGIGIQEHASIDLPGIKGMWALTVASDAK
LDNTLVLAFVGQTRVLSLNGEEVEETDIVGFASDQQTFYCGNVAHDQLVQVTPMSVRLVS
AQLKTLLAEWKPPTEKSISVVACNTEQIVVSTGSELFYIEIHPNELILKGRTTLDVEPAC
LDISPLGEGATRSNLVAVGLWTDISARILRLPDLIEAYKENLGGEIIPRSVLMTNFEGHS
YLLCALGDGSMFYFNLHKDSGTLSEKKRVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNMKEVNHMCSLNAEAYPDSLALATDSSVTIGTIDEIQKLHIRTVPLQES
PRRIAYQESSQTFGVLAARMDVQDSTGLNPSRPSASTMTQSVTVSSSVGSLTLGKSGASG
LSGGNTVPEYGQEVEVYNLLIIDQHTFEFLHAHQFMQQEYAMSLISCQLGDDPNIYYVVG
TAFVNPEEPESKSGRLILFHWADNKLTQISEKEIKGACHSLAEFNGKLLATINSTVRLFE
WTAEKELRLECSYFHNILALYLKTKGDFILVGDLLRNMTLLQYKTMEGSFDEIARDFNPN
WMTAIEILDDDTFLGAENSYNIFICQKDSAATTDEERAQMQEVGQFHVGDMINVFRPGSL
VMQNLGETSTPTSGCVLFGTVGGAIGLVTQIQPDFFEFLLELQNKLSVVIKSVGKIEHSF
WRTFHTDIKTEPAEGFIDGDLIESFLDLSADKMKEVADGLQLVGEGGVKQDCTVDDLIKM
VEDLTRIH
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcactatgttgtgactgctcataagccaacagccgtaacggcttgtgtaaca
ggtaactttacatctccaaacgatttaaacttgatcgtagctaaaactacgaggctagaa
atttatcttgtaacccctgaaggtctacgacctgtaaaggaagttggaatatatggaaaa
atagttgttttaaaactatttcggccacaaaatgaaaaaaaagaccttttatttattgtt
acaatgaagtataatgctatgattttggagtgtataaatgatggagagaatttagaaata
attacaaaagcacatggtaatgttgctgatagaataggaaaacctgcagatactggcata
attgcagtaattgatcccaaagcgagagtgattggtcttcgcttatatgatggattgttt
aaaataattccacttgataaagagaataatgaattaaaagcttcaaatataagaatggat
gaattgcaagtgcaagatgtagaatttttacatggttgtgctaatccaacaatagtttta
atacatcaggatttgaatggtcgtcatgttaagacacatgaaatatcattaagggataaa
gagttcgtgaaaattccttggaggcaagacaatgtggaaacagaagcctcaatgattatt
ccagttccttcgccactttgtggagctattgttattggacaagaaagtattttatatcat
gatggtataacatcagttgctgtagcacccccaataataaaacaaagcacaatagtatgt
tatgctagagtagaccctggaggattacgatatttgttaggagatatggcagggcatctg
ttcatgttattcctggatgttgaaagtcgtggtgatggggctgatgtagttaaagattta
aaagttgaattattaggtgaaatagcaactccagagtgtatcacttatttggacaatggt
gtaatctttattggctctcgattgggagactcacagttagtgaaactaaataccaaagcc
gacgataatggatcatacgtcacgctgatggaatctttcacaaatttggcccccatagtc
gatatgtgcgttgtagatttggaaaggcaagggcaaggacagctcgtgacatgttccgga
gcttataaagatggctccctgagaattatcagaaatggaatcgggatacaagagcacgcg
tcaatcgatttgccagggattaaaggaatgtgggcactaactgtagcctcggatgcgaaa
ttggacaacaccctagtgcttgcattcgtaggccaaacgagggtattgagcttgaatggt
gaagaggtggaagaaacagatattgtaggctttgcttcagaccagcaaactttctattgt
ggaaatgtagcacatgatcagcttgttcaggttacgccaatgtcggtgcgacttgtctct
gctcagttaaagacactattagccgaatggaaaccgcccaccgagaaaagtattagcgtt
gtcgcgtgtaacaccgaacaaattgtcgtatcgacaggatcagaacttttctacatcgaa
attcatcccaacgaactcatcctcaaagggcgaacaacgctagatgtggagcccgcatgt
ttggatattagtcctcttggagaaggtgccacaagatcgaatttagtggctgtcggcctg
tggacggacatttctgcgcgtattctgaggctaccagaccttatagaagcgtacaaagaa
aatctaggtggagagataattccgcggtcagtactgatgacaaatttcgagggacacagt
tacctattgtgtgccctgggcgacggttcaatgttctacttcaatttgcacaaggactcg
ggcacgttgtcggaaaagaaaagggtcacgctgggcacccagccgactgttctgcgtacc
ttccgatcgctaagcacgacgaatgtgtttgcatgctccgatcgacctacggttatatat
tcatccaatcataaacttgtcttctcgaacgtcaacatgaaggaggtaaatcacatgtgt
tcgttgaacgccgaagcctatcctgacagtttagctctagcgaccgacagttcggtaaca
ataggtaccatcgacgaaattcaaaaactccatattcgtacagtgcctctacaggaatcc
ccgaggagaattgcataccaagagtcttctcagacatttggcgtgttggctgcaagaatg
gatgtgcaagactcgaccggtttgaacccttctcgaccgagtgcgtcaacgatgacccaa
tcggtgacggtgtcaagtagcgtgggttcacttacgttgggcaaatcaggagccagtggt
ctctcaggagggaatacagtccccgagtacggtcaggaggtcgaagtttataatctcttg
atcatcgatcagcacacgtttgaattcctgcatgcacaccagtttatgcaacaggagtat
gcgatgagcctcatttcgtgtcaacttggtgacgaccccaatatttattatgtagttggt
actgcttttgttaatcctgaagaaccagaatcaaaatcaggcaggttgatcctgtttcat
tgggctgataataagctcacacagatctcagaaaaggaaatcaaaggtgcttgtcattcc
ctagctgagtttaatggtaaactcctagctactattaacagcaccgtgcgattgtttgaa
tggacagcagagaaggaacttcggcttgaatgctcctatttccataacattcttgcactg
tatttgaaaactaaaggcgattttattctcgttggcgacttgctgcgtaatatgaccctc
ctgcagtacaaaaccatggaaggtagtttcgatgagattgctcgagatttcaatcccaat
tggatgacagcaattgagatcttggacgacgatacttttttgggagccgaaaattcgtat
aacatatttatatgccaaaaggacagcgctgcaacgacggacgaagaaagggcgcaaatg
caagaagttggccagtttcatgtcggcgatatgattaacgtgtttcgacctgggagtcta
gtaatgcaaaatttgggtgaaacgtcaacacccacttcaggctgcgtgctttttggcaca
gttggtggggccataggtttagttacacaaatccagccagacttttttgaattcctgctt
gagctgcagaacaaattatcggtagtaataaaatcggtagggaaaatagagcattcattt
tggcgtacttttcacacagacataaagactgaaccggccgaaggtttcattgatggagat
ttaatagagagttttctggatctatcagctgataaaatgaaagaagtcgctgacggcttg
cagctcgtcggggagggtggagtaaaacaggactgtacagtagatgaccttattaaaatg
gtagaagatttaacaaggatacattag
DBGET
integrated database retrieval system
