Agrilus planipennis (emerald ash borer): 108738750
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Entry
108738750 CDS
T07419
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108738750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108738750
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
108738750
U7-dependent histone pre-mRNA processing factors
108738750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_Rrp7
Utp12
DUF908
Motif
Other DBs
NCBI-GeneID:
108738750
NCBI-ProteinID:
XP_018327819
UniProt:
A0A1W4WVC2
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MDSLDANIMDKSMRSVFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFC
EYRDQETALSAMRNLNGYEIGGRNLRVDNACTEKSRMEMQNLLNQPPVENPYGEPIQSEK
APEAISKAVASLPPEQMFELMKQMKICIQNNPQEARTMLLQNPQLAYALLQAQVIMRILD
PQIACSMLHPTNPIPEPLVPNNKPISGPVPINSNFAPAPPQPVQPPIRHDFPQIPPPTTN
ILPPAAGPVFSSQDVDLRSMDIRPASDPRLTNRDQDMRTLPVQMPNPVPPPATPEIRDPR
AAAPPPAPTFVNDPRQARLQDPRQKTVLPPTTTPVVPVITGPRPAPGPTPVTVTPSIIPP
RTNPGASPNIGPSGASDQEKAALIMQVLQLSDEQIAMLPPEQRNSILVLKEQIAKSTQTR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatagcttagatgcaaatataatggataaatccatgcgatctgttttcgtgggaaat
attccatacgaagcaacagaggaaaaactgaaagatatttttggtgaagttggtcaagtg
ctttcttttaagctcgtgttcgaccgcgaaacaggaaaacctaaaggatatggattttgt
gaatacagagatcaagaaactgccctcagtgctatgcgtaatttgaatggttatgaaatt
gggggtcgtaatttaagagtggacaatgcatgtacagaaaaatcccgaatggagatgcaa
aatcttctcaatcaacctccagttgaaaatccttatggggaaccaattcaatcagaaaag
gcacccgaagcaataagcaaagcagtagcatcactaccacctgaacaaatgtttgaatta
atgaaacagatgaaaatatgtatacaaaataacccccaagaagctagaacaatgctcttg
caaaatccacagctagcttatgcacttctccaagcacaggtgataatgagaattctagac
cctcaaatagcttgtagcatgttacatcctacaaatccaattccagaacctctggttcca
aacaataagcccataagtggaccggtgccgataaacagcaactttgctcctgccccacca
cagcctgtgcaaccacctatcagacatgactttccacaaataccaccccctactacaaat
atcttaccacctgctgcaggtcctgttttctccagtcaagatgttgacctacgatcaatg
gatataagacctgcaagtgatcctagactaacaaatcgagaccaagacatgagaactttg
ccagttcaaatgcccaatcctgtaccacccccagcaacacctgaaattcgtgatccccga
gcagcagcaccaccaccagctccaacatttgtcaatgatccaagacaagcaagactgcaa
gatcctagacaaaaaactgtcctgcctccgacaacgactcctgttgttcccgttattaca
ggccccagacctgcacctgggcctactccagtgactgtaactccttctatcataccgccc
agaacaaatccgggtgcatctccaaatattggacccagtggagcctcagatcaagaaaag
gcagcacttataatgcaagtgctacaattgtctgatgaacaaatagcaatgctcccgcct
gaacaacgaaacagtattttggttttgaaagaacaaattgctaaaagtacccaaacacgt
taa
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