Agrilus planipennis (emerald ash borer): 108739038
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Entry
108739038 CDS
T07419
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108739038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apln03041
]
108739038
03009 Ribosome biogenesis [BR:
apln03009
]
108739038
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108739038
Spliceosome [BR:
apln03041
]
Complex A
U1 snRNP components
U1 related factors
108739038
Complex B
108739038
Ribosome biogenesis [BR:
apln03009
]
Eukaryotic type
Pre-60S particles
Helicases
108739038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
ERCC3_RAD25_C
Diphthami_syn_2
Cas3-like_C_2
MEIOC
UPF0137
Motif
Other DBs
NCBI-GeneID:
108739038
NCBI-ProteinID:
XP_018328219
UniProt:
A0A1W4WWH6
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MVIGRVVLARFPTFFSKSINLLKMSFKKNEGKPYAPRRDASNFNNKSQRGGGYKQNGLNG
NYSNNGYGRFGSNGSNNNFNRTMEKPNWGKETLAPINKSYYVPHAHIAKRSSFEIDQFRR
SKEITVEGEDIPHPIQKFDECNFPDYVMEEIRKQGYDEPTAIQAQGWPIAMSGKDMVGIA
QTGSGKTLAYILPAIMHINNQEATKRGDGPTVLVLAPTRELAQQIQKIATEFGSSSYIRN
TCIFGGAPKGPQARDLERGVEIVIATPGRLIDFLERGTTNLKRCTYLVLDEADRMLDMGF
EPQIRKILQQVRPDRQTLMWSATWPKEVKKLASDFLSNYIHINVGSMQLSANHNIVQIVD
VCQEQEKEQKLTNLLQEVGSDDADTKIVVFVETKKKVETITKVIRRIGWSAVAMHGDKSQ
QERDYVLKEFRNGKFNILVATDVAARGLDVEGIKYVINFDYPNSSEDYIHRIGRTGRSDS
TGTSYAFFTPNNFKQAKDLVSVLKEANQEINPKLYEMASRAGNYGNGNSRFSRWGTSKGG
FGGNGQRTHTRFGGAGNSRFSNGYNNSNGYSA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggtaataggcagagtagtgcttgcccgattccccacgtttttctcgaaatcaattaat
ttactaaaaatgtcgtttaaaaaaaatgaaggaaagccttatgctcctcgtcgagatgcc
agtaacttcaacaataaaagtcaaagggggggaggttacaaacagaacggtcttaatggg
aattattcaaacaatggttatggccgttttggatctaatgggagcaacaacaacttcaat
cgcaccatggaaaaaccaaattggggaaaggaaactttggcaccaataaataaatcctac
tatgttccccatgctcacattgccaaacgttcctcctttgaaatcgatcaattccgtcgt
tctaaagagatcactgttgaaggcgaggacattcctcatcccatacaaaaatttgacgag
tgcaacttcccagattatgtcatggaagaaattagaaagcagggctatgatgaaccaact
gctatccaagcccagggctggcctattgccatgagcgggaaagatatggttggaatagct
cagacaggttcgggcaagacactagcgtatattcttcctgccattatgcacattaataac
caggaagccaccaaacgcggagacggtcccacagtcctggttttggcaccaactcgcgaa
ttagcgcagcagatccaaaaaattgcgacagaatttggcagctcttcgtacattcgcaac
acttgtatatttgggggagctccaaaaggtccacaagcccgtgacttggaacgcggcgtc
gaaatcgtcattgcaacccctggacggttgatcgacttcctggaaagaggcaccacaaat
ctcaagagatgtacctatttggtcttggacgaagcagacaggatgttggacatgggattt
gagccccagattcgaaagatccttcagcaagtacgtcccgatcgtcaaaccctcatgtgg
tctgccacatggcccaaagaagtaaaaaaacttgcctccgactttcttagcaattacatt
cacataaacgtcggttccatgcaactgtctgccaatcacaacattgtacagatagtagat
gtgtgccaagagcaggaaaaagaacaaaaattgacgaatttattgcaagaagtggggtca
gacgatgccgacaccaagattgtcgtgttcgtggaaacaaagaaaaaagtcgaaaccata
actaaagtaattcgaagaattggttggtctgcagttgcaatgcacggggataaaagccag
caagaacgtgattatgtcttgaaggagttccgaaatgggaagttcaacatcttggtagct
actgacgttgcagcccgtggacttgatgtggaagggatcaaatacgttataaatttcgat
tatcccaattcttctgaggattatattcaccggatcggtaggacgggacggtcagactct
acagggacgtcgtacgcctttttcacgcccaataatttcaaacaagctaaagatctagtg
tctgttcttaaagaagctaatcaagagataaatccgaaattgtacgagatggcaagtcgt
gctggtaactatggaaatggtaacagcagattttccaggtggggcaccagcaaaggtgga
ttcggtggtaacggacaaaggacccataccagatttgggggtgctggcaactcaaggttt
tctaatggatataataacagtaacggatattctgcgtaa
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