Agrilus planipennis (emerald ash borer): 108739182
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Entry
108739182 CDS
T07419
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apln03009
]
108739182
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108739182
Ribosome biogenesis [BR:
apln03009
]
Eukaryotic type
Pre-60S particles
Helicases
108739182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
DUF1604
Motif
Other DBs
NCBI-GeneID:
108739182
NCBI-ProteinID:
XP_025833848
UniProt:
A0A7F5RD03
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MYSCLQDSEKFINTSEMDSVLPGFENLDTFKVSEDLQNDTVKKKSKKGGGFQTMGLSFNV
LKGITKRGYKVPTPIQRKSIPLVMEGRDVVAMARTGSGKTACFLIPLFEKLKMRIAKAGA
RALILSPTRELVLQTFKFIKELGKFTGLKAAVVLGGDSMEEQFSSIHGNPDVIVATPGRF
LHVCIEMDLKLKSIEYVVFDEADRLFEMGFGEQLTEIVNRLPDSRQTVLFSATLPKVLVD
FAKAGLSDPVLIRLDVESKLPTELKLLFLIVRPEEKVAALLMLLKSHIDSKQQTVVFVAT
KHHVEYLHSILDYCGISNTYIYSNLDPSARKIHAAKFTTGKVKVLVVTDVAARGIDIPQL
DNVINFNFPAKSKLFVHRVGRCARAGRTGTAYSLVTPDEYAYLLDLHLFLGRPLILAGPN
STLNETVVGKMPQGIIEEQFSLLVTLHETHVDLVSMSNVCENAYKQYIRSRPLSSADSNR
RVKEMPFASCGIHPVFKNETGELEADRELLLGQMKNYRPPGTIFEICGKNKSVDYITMKN
KRAVHKSVIESFHEKTKEKEKLKPTFDESKKADLTVSDNHDIEETFKTVVLPKKRKIEEI
YKKKTKKVKDEEHFIPYVPPDRHTEEGLAINNFQKDAIKAQFDLIGDSSEMLQSSKNQIR
WDRKKKKMVAVNPNPKAGKIKTESGAWIPSSYKSDRYAQWKEKTKAAEQEEDSEDDEQKK
QINKFKNIKTHWARHNEKVMTKQRKSELKTTEQILKARKIAEKKKMRQKKKFKKSKTKHR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtatagctgtctacaagatagtgaaaaattcataaatacctctgaaatggacagtgtt
ttaccaggcttcgaaaatttggatacgtttaaagtttccgaagacctacaaaatgatacg
gttaaaaaaaaatctaagaaaggtggaggatttcaaacaatgggtttaagttttaacgtt
ttaaaaggaataacaaaacgtggttataaagtaccaacaccaattcaacgaaaatctata
ccgctcgtaatggaaggacgcgatgttgttgctatggctcgaactggaagtggtaaaaca
gcatgtttcttaattcctctctttgaaaaacttaaaatgcgaattgctaaagcaggtgcc
agagcacttatactttcacctacaagggagctagttttacaaacgtttaaatttattaaa
gaactgggaaaatttactggattaaaagcagcagttgtcctaggaggagattcaatggaa
gaacaattttcgtctattcatggtaatccagatgttatagtagctactccaggcagattt
ttacatgtctgcatagagatggatctaaaattaaaaagtattgaatatgttgtatttgat
gaagcagacagactatttgaaatgggatttggagaacagcttactgagattgttaacaga
ttaccagattcgagacaaactgttcttttttctgctacacttcctaaagtacttgtggat
tttgcaaaagctggcttgagtgatcctgtgttaataagattggatgttgaatcaaaacta
cccactgagttgaagttactatttttaattgtacgtcctgaggaaaaagttgcagctcta
cttatgttactgaaaagtcatattgatagtaaacaacaaacagttgtttttgttgcaaca
aaacaccatgttgaatatttacattcgatactagattattgtggcataagtaacacgtat
atctattcaaacttggatccatcagctagaaaaattcacgcagcaaaatttacaacagga
aaagttaaggttttagttgtaacagatgttgctgctagaggaattgatataccccagcta
gataatgtaattaactttaactttcctgcaaaatcaaaactttttgtgcatcgagtcggt
cgttgtgcacgagctggcagaaccggaactgcctattcattagtaacaccagatgagtat
gcatatcttttagatttgcacctctttttgggacgtccgctgatattggcgggaccaaat
agtaccctcaatgaaactgtcgttgggaaaatgccccagggtattatagaagaacagttt
agtctgctggttactctccacgaaactcacgttgatttggtgagtatgagtaatgtttgt
gaaaatgcttataaacaatacataagatcaagacctctctcatctgccgatagtaatcgt
agagtgaaggaaatgccttttgcatcttgcggcattcatccagtattcaaaaatgaaact
ggagaattggaagctgacagggaattattactgggacaaatgaaaaactacaggccaccc
gggacaattttcgaaatttgcggtaaaaacaaatcggttgattatattacaatgaaaaac
aaaagagctgtacataagagtgtaattgaatcttttcatgaaaaaactaaagaaaaggaa
aaattaaaaccgactttcgacgaaagcaaaaaagcagatcttaccgttagtgataatcac
gatatagaagaaacgtttaaaacagttgttttaccaaaaaaacgaaaaatcgaagaaatt
tataaaaagaaaacgaaaaaggtcaaggatgaagaacattttattccatacgtccctcca
gacagacatactgaggaaggactggccataaataattttcaaaaagatgcaataaaagca
cagtttgacttaataggtgattcttctgaaatgttacaatcctctaaaaatcaaataagg
tgggaccgtaaaaagaagaaaatggtagcagtaaatcctaatccgaaagctggtaaaata
aaaacagaatcaggagcttggataccttcgagttataaaagcgaccgatacgctcagtgg
aaagaaaaaacgaaagctgcagaacaggaggaagatagtgaagatgatgaacagaaaaag
caaataaataaatttaaaaatattaaaacccattgggccaggcacaatgaaaaagtaatg
acgaaacaaagaaaatcggaattaaaaacgacagaacaaatccttaaagcgagaaagatt
gcagaaaagaaaaagatgcgccaaaagaagaaatttaagaaatcaaaaacaaagcatcgt
tga
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