Agrilus planipennis (emerald ash borer): 108739796
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Entry
108739796 CDS
T07419
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03018
RNA degradation
apln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108739796
09123 Folding, sorting and degradation
03018 RNA degradation
108739796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108739796
03041 Spliceosome [BR:
apln03041
]
108739796
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108739796
mRNA degradation factors
5'-3' decay
Lsm complex
108739796
Spliceosome [BR:
apln03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108739796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108739796
NCBI-ProteinID:
XP_018329360
UniProt:
A0A1W4XAK9
LinkDB
All DBs
Position
Unknown
AA seq
130 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEATIKNRGRDNKTGKNQRGRPATRGNFGSRGAKSGNIGK
NPNQKMKLKQ
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctttcattattacgaacagcacaaaatcatcctatgttagtagagcttaaa
aatggagaaacatacaatggtcacttggttagttgcgataattggatgaatattaactta
cgtgaagtaatttgtacatcaagggatggtgataagttttggaggatgccagagtgttac
atacgtggtagtacaattaaatacctacgaattccagatgaaattattgatatggtaaaa
gaagaagctactattaaaaatcgtggcagagataataaaactggtaaaaatcaaagaggg
agacctgcaactagaggtaactttggtagcaggggtgcaaaatctggaaatatcggtaaa
aatccaaatcagaaaatgaaacttaaacagtaa
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