KEGG   Agrilus planipennis (emerald ash borer): 108740296
Entry
108740296         CDS       T07419                                 
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
apln  Agrilus planipennis (emerald ash borer)
Pathway
apln03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apln00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108740296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apln03019]
    108740296
Messenger RNA biogenesis [BR:apln03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108740296
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     108740296
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 108740296
NCBI-ProteinID: XP_018330081
UniProt: A0A1W4X1S1
LinkDB
Position
Unknown
AA seq 760 aa
MADTYCGLGAQINNDDAVALPDDDLDCIESDEDYDALNDETFGALEDSSTLDDWEQQHEN
FAKLAESRKHSDQIEDSLNKLVLDGTEDINSLNKKSIWSFEGSRNGENVLTIFSSLNKNY
IDSKKDTESDLLNCSLNNIRPPPGIISQVPKKVISVEELERGLIKNNAKLSQSSTSVHPP
LPFPPQHSQLPRPSHLPHSPHQNGPIFQHPMLQHNMPPRPPPGLPHHPHMPLMPPRHPNV
PPNPLMHMVPPIPPHFMQGNQIAPPGMMYPGGSQFPVNHPYNFPPPPRNVNSLGYGHPNR
NQNNYQNYYQNNRQGRMDPNHNVRQRNSKSMINNINNNGHYGNIVQDEYAGLMSGREKQW
LLNIQMLQLNTGTPYFDDYYYTIFKERKARQNKENQPLEQIQRHRRNSERQDSQNHLTPK
VYTPLQFENSLGKLQCGSVTAPRKIIDMDVVSMDKESEVGSTVSSRDSRKTKQLLLELEA
LYSLLLKVEDLRNPMYHANIEKLVELKQKQRLRELETASTTEQKQEILKQLQQDSVITTE
NQQEVLTKVANGFCLDEKFSSFLAIRKGKMLLLRLLPYLSADLFTTHLSDLWLKVLLSIP
TVGRRDTAGDNLLPKLYPYFKKYIQTCNMSNILDIVTNLVESFKLDNSRSTPLSYQGKTP
LNFIVANKFGVSALSTMLVRMEYLLSTNDATERQLSDWQNFVEAWCDAVPSFSSSSSSTV
ATPLESIPTPVFNKHCNRIGELLTTSVKCQLFRKHFVDTE
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggctgatacttattgcggattaggagcacaaataaataatgacgacgccgtagcttta
cctgacgatgacttagactgtattgaaagtgatgaagactatgatgcgttaaatgatgag
acttttggagctctagaagattcgtctactttggatgattgggaacaacaacatgagaac
tttgctaaacttgcagaaagtcgaaagcattcggatcaaattgaggactctttaaacaaa
ttagttctcgatggcacagaagatattaactcattaaacaagaaatcaatttggtcattt
gaaggttcaagaaatggagaaaatgtattgactattttctctagcttaaataaaaactat
attgactcaaagaaagatactgaatctgatcttcttaattgttctctaaataatattcgg
ccaccccctgggataatatctcaggttcctaaaaaagttattagtgttgaagaacttgaa
cgtggactaataaaaaataatgcgaaactatcacaatcatctacatcagtacatccccca
ttgccttttcctccacaacactcgcagcttccccgcccttctcatctcccgcattcaccc
catcaaaatggacctatttttcaacatcctatgcttcagcacaatatgcctcctagacct
ccacctggtttaccacatcatccacacatgccgttgatgccaccacgacacccaaatgtg
ccacccaaccctcttatgcatatggtgcctcccattcctccacattttatgcaaggaaat
caaattgctccacctggaatgatgtatcctggaggctctcaatttcctgttaatcatcct
tataatttcccgccgcctccaagaaacgtaaattcccttggttatggtcatcctaacaga
aaccaaaacaattaccaaaattactaccaaaacaatagacaggggcggatggaccctaac
cataatgtcagacaaagaaattctaaatcaatgattaataatattaataacaatggtcat
tatggtaatatagtccaagatgaatatgcaggactgatgagcggtagagagaagcaatgg
cttttgaatatccaaatgttacaattgaatacgggaacaccctactttgatgattattac
tatacgatattcaaggagagaaaggcgcgacaaaataaagaaaatcaaccgcttgagcaa
attcaaagacacagaagaaatagtgaacgacaagacagtcaaaaccatctaacacctaaa
gtatatacgcctttgcaatttgaaaattctttgggaaagctgcagtgtggctcggtcacg
gctccacgtaaaataatcgatatggacgttgtatccatggataaagaatcggaagtagga
tcaacagtttcgtcgcgagacagtcgtaaaacaaagcagctcttactggaacttgaggca
ctgtattctctcttgttgaaagtggaagacttgagaaatcctatgtatcatgcaaatatc
gagaaactggtcgagttgaaacagaaacaaagacttcgagaactggaaactgcttccact
acagaacaaaagcaagaaatcctcaaacaacttcaacaggacagcgtgataacgaccgag
aatcagcaagaagtgctgactaaagtggcgaatggattttgtttggacgaaaaattttcc
agttttttagctattcgaaaaggaaaaatgttgttgttaaggctattgccatacttatca
gctgatttatttactactcatctatcagacctgtggttaaaggtgcttctgagcataccg
acagtcggtcgtagagatacggcgggtgacaacctgcttccaaagctttatccgtatttt
aagaagtatattcaaacttgtaatatgagcaatattttggatatcgttacgaacttagta
gaatcttttaaactggacaacagcagaagtactccccttagttatcaaggaaaaactccc
ctcaattttatagtggctaataagttcggtgtttcggctctttcgactatgctcgttcgc
atggagtacctgttgtcaactaatgatgcgactgaacgacaattgtctgactggcaaaat
ttcgtggaggcgtggtgtgatgcggtcccttcgttctcttcctcatcctcaagtaccgtg
gctacacctctcgaatccatacctacgcccgtatttaacaagcactgtaatcgcattggc
gaactgctgactacatccgttaaatgtcagctgttccgcaaacatttcgtagacaccgaa
taa

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