Agrilus planipennis (emerald ash borer): 108741260
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Entry
108741260 CDS
T07419
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108741260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108741260
03036 Chromosome and associated proteins [BR:
apln03036
]
108741260
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108741260
Chromosome and associated proteins [BR:
apln03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108741260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
108741260
NCBI-ProteinID:
XP_018331488
UniProt:
A0A1W4XGA7
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MFSKSTFGTTPSSTSFGFGSTNTNQNLFGQSSSLFGKPATAGFGSSNTTFGNPAPIFGSS
TPLFPSNTSGTFGANQNQPAFGSTLFGNQQNANTGNLFGSNSSTFGQQNKPVGFGFSSTA
PTNRLFSQTTAPQTPFQSTSSTSLFGQSTGFGNTQTGTVIKFNPVTGTDTMQKSGVATNI
NTKHHCITCMKEYEGKSLEELRWEDYQANRKGPQQQGGFGVAPFGMTPTSSAQSLFGQST
DNKTTFGQMGTFNQSSGFGLGTQTGQTGSLFGKPNTTFGTTTTSSSFGFNNTPASNPFST
NPSQAFPQSKPLFGATNTQTSGFGGTGIFGQSGTQPTQSNMFGQNQTSGFGLNTGFGQMQ
QNQGGIFQTSKPATSFGPFSQTITSAPSFGQPTGTFGQSNAFNTFGKPAQSTFGNPQGSF
GTSLGTQSNGGLFGNLQQKSGGFFGNTNPTSIFSGGTTFQPNTGFNLQQMQSQLNTLQPT
SEQSEELKAQLQNAGTFGRSKILSGLTPLKEDDNKRTTNPRELKVILDSSLKVKLPSPIK
NKPNMAPVNNSRMDVFDGAMGKTKFDSKDYIKMTRKRLIIRKKGDTEMHSNSSTEISLFD
FEGDEVTDNNFTRKLQTNKETLELNANASNNRISVKPALKSSGENLNSSVDVLWLKSNNI
LNDANSSSAKNKYEGGIINDDTSGNDKRLEADKENFKEAEHASKHPCGITLTRPEYYTYP
SLDQLTQYLRDDGTCIVQGFTIGRVGYGNVYYPDAFDVANLNLDKIIFFRLGEIIVYPDE
SATPPVGQGLNRRAQVTLDKVWPKTKDGSIILTDIKEINAINFVDKLQQICKKRNSKFME
YRPETGSWVFQVEHFSKHGLSDSDEEEVSEKVRKLRDKTVTEEHKTTDKEVNEKQKGKHS
PLETTVGKPKEVVQVHDKSLPSNVSDPVDVFQMSEPVVGLGGFQLGLPKSNASVSSDDIS
PLDKNETFPSLRSSRHYIYKEVEPAQLALMKTSFFDERLHDIIENDSDENNSDLIKMSLN
AVTDFQPEPKLVSVEKRVKQTSLLPRSFELRNRKCIVSNENSILHNRRNYKDMSVFLGRS
FRVGWSVGNIFTNTSSSPTCTHNVQFCNLSSFIENDNNPFYRTLLNHLHITKENSKLSVN
HLGVPMFKVNSGFNILCEHQELVSSNLKENDFNSMSFYYSCIWDLIIALWMPQGNLTRRD
IFSNWLKRAVMFDVEKELCSQIEIDTGMNNVFNKIFTFLTGHRIDEAAKLALKNNLPQLS
LQISQLNSVRIVKSFSEKQFFQWNTSGAVKHINEDLLKTYMLITGISVHQEINISESLDW
KRALGLHLWYIIPVEQPISAVLKAYKKAFSELCYSRKPFPCHGDNVNYNTTDKYDILYHI
ISLFVYPYEGLHHILEPITYTNNPLDYSLSWFLMNTFEALDIGKITQDTKNYVHISFSNQ
LESMGYWQWAIFVLLFLKDENIRQNLIIKILERHLTSDLTEETLEMEEFLVNEFSIPSDW
IHRTKGRRAKFENKNWEAYKHMILSKQWMSGHDFAFSKLIPDLMTHNDLYLLEKVLEILL
PGHKTIMEWKVKGGLLLDFLNIWKLINNKQKGEIEESSLRAIEIDLLDLLARLKKFPITT
NKKALSISECSKCIAFLLKKFYLELQNKSYANICKTSSYIESLVIAPDYKQDELIKSLFN
MVNIQMIN
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaagtcaacttttggtacaacaccttcatccacatcatttggatttggttct
actaacacaaatcaaaatctttttggacaatcctcatcattatttggaaaaccagcaact
gcaggatttgggagttcaaatactacttttggaaacccagcccctatttttggttcttcg
acccctctatttcccagtaatacctctggaacatttggtgctaatcaaaatcagccagcc
ttcggatcaacgttatttggaaaccagcaaaatgctaatacaggtaatttatttggaagc
aactcctccacatttggccaacaaaataagcccgttggctttggtttttcttctacagct
cccactaatcggctctttagtcagacaacagccccacaaacaccatttcagtcgacatct
tcaactagtttatttggtcagtcaactggatttggcaatactcaaactggtactgttatc
aaattcaatccagttactggcacagacaccatgcaaaagagtggagtagcaactaacatt
aatacaaagcatcattgtataacatgtatgaaggaatatgaagggaaatcccttgaagaa
cttagatgggaagattatcaagcaaatagaaaaggaccacaacaacaagggggctttggt
gtggctccttttggaatgacgccaacatcttcagcacaatctctttttggacagtcaact
gataataaaaccacttttggccaaatgggaacatttaatcaaagttcaggatttggtctt
ggcacacaaactggtcaaacaggaagcttatttggtaaaccaaataccacatttggaact
actacaacatctagcagttttgggtttaataatacaccagcctcaaacccattctcaaca
aacccttcccaggccttccctcaatcaaaaccattatttggagccacaaatacccaaaca
tctggatttgggggtacgggaattttcggacaatctggcacacagccaacacagtcaaat
atgtttggtcaaaaccaaaccagtggctttggcctaaatactggctttggtcagatgcaa
caaaatcaaggaggtatttttcaaacatctaaaccagccacatcttttggaccgttttct
caaactattactagtgctccatcatttggacaacccacgggcacatttggccaaagcaat
gcttttaacacatttggaaagcctgcccaatcaacttttggaaatcctcagggtagtttt
ggaacttctcttggtactcaatctaatggaggcttatttggaaacttacaacaaaaatca
ggtggattttttggtaatacaaatcccacaagtatcttctcagggggaacaactttccag
ccaaatactggttttaatttacagcaaatgcagtcacagttaaatacattgcaaccaaca
tctgaacagtcagaagagctaaaagcacaattgcagaatgctggcacttttggtaggagt
aaaatcctgtcaggtttgactcctttaaaagaagatgataataaacgaaccactaatccg
agagaattgaaggtaattctggatagttctctaaaagtaaagttgccatcacccattaaa
aacaagcccaacatggctccagtaaataattcaaggatggatgtttttgacggtgctatg
ggtaaaactaagtttgactccaaagattacattaaaatgacgcgtaaaagattgatcatt
cgtaaaaaaggtgacacagagatgcactcaaattcatccactgaaattagtttatttgat
tttgaaggagatgaagtaacagataataatttcacaagaaaattacaaacaaataaggaa
acattggaattaaatgctaacgctagtaataatcgaatatcggtaaaacctgctctaaaa
agtagcggtgagaaccttaatagttcagtagatgtactttggcttaagtctaataatatc
ttgaatgatgctaatagttcatctgctaaaaataagtatgaaggaggtatcataaatgac
gatactagtggtaatgataaaaggcttgaagcagataaagaaaattttaaagaagcagaa
catgcgtctaaacatccatgtggaattaccttaacacgccctgaatattatacataccca
tctttggatcagctaacgcaatacctaagagatgatggaacttgtattgtgcaaggattt
accataggacgggttggttacgggaatgtttattatccagatgcattcgatgtagccaac
ttgaatctagataaaataattttcttccgcttgggggaaatcatcgtgtatcccgatgaa
tctgcgacaccacctgttggccaaggtctaaacagacgagctcaagtaactttagataaa
gtatggcccaaaacgaaggatggtagcatcattttgactgatataaaagagataaatgcc
attaattttgttgacaaattacaacaaatttgtaaaaagcgaaattcaaaattcatggag
tatcgaccagaaacaggttcttgggtttttcaagttgagcatttttctaagcatggttta
agtgatagcgatgaagaggaagtatcagaaaaagtacgaaaactacgtgataaaactgtc
actgaagagcataaaactactgataaagaagtaaatgaaaaacaaaaaggaaaacattca
ccactggaaacaactgttggcaaaccaaaagaagttgttcaagttcatgataaatcatta
ccatcaaacgtatccgatcctgtggacgtatttcaaatgtctgagccggttgtaggtctt
ggtggtttccaattaggtcttcccaagtcaaatgcttcagtttctagcgatgatatatct
cctctggataaaaatgaaacttttccttcattaagatcttccagacattacatttacaag
gaagtagaaccagctcagttggccttgatgaagacttcttttttcgacgaaagacttcat
gatattatcgagaatgattctgacgaaaataattctgatttaattaaaatgtcgttaaac
gccgtcactgattttcaaccagaaccgaaattagtttcagttgagaaaagagtaaaacag
acatctctccttccaaggtcttttgaacttcgtaatcggaagtgcattgtctccaatgaa
aatagtatcttacataatcgcaggaattacaaggatatgtccgttttcttaggacgttca
tttagagtaggatggagtgttggtaatatattcacgaatacatcttcttctcctacttgt
acccataatgttcaattttgtaatctatcttcctttattgaaaacgataataatccgttt
tatcgcacgttattaaatcatcttcatattactaaagaaaattccaaactaagtgtaaac
catttgggagtcccaatgtttaaggtgaactcaggttttaatattctttgtgagcatcag
gagttggtcagctcaaatctaaaagaaaacgatttcaacagcatgagtttttattacagt
tgcatttgggacctaataatagctttgtggatgccccaaggtaatttaacaagacgggac
atctttagcaactggttgaaaagagcagttatgtttgatgttgaaaaagaactttgttct
caaatagaaatagatactggaatgaacaatgtgtttaataagatttttacatttctaact
ggccataggatagacgaagctgcaaaattagcattaaaaaataatttacctcaacttagc
ttgcaaatttctcagttaaattctgttcgtattgtaaaaagtttttctgaaaaacagttt
ttccaatggaatacttcaggagcagttaagcatattaatgaagacctattgaagacttat
atgcttattactggaatttctgtacatcaagaaattaatattagtgaaagtttagattgg
aagagggctttaggtcttcacttatggtacataataccagttgaacagcctatatctgct
gttttaaaggcttataaaaaggcattcagcgaactatgttactcaagaaagccttttcct
tgtcatggtgataatgtcaactacaatactactgacaagtatgacattttgtatcatata
atttctctttttgtgtacccttatgaaggtttgcatcatattttggagcctataacttac
actaacaatcccctagattatagcctcagttggttccttatgaatacattcgaggctttg
gacatagggaaaataacacaggatactaaaaattatgttcatataagtttctccaatcaa
ttagaaagtatgggctattggcagtgggcaatttttgtattactcttcttaaaagatgaa
aacataagacagaatttgataattaaaatactggaacggcacttgacctctgatttaacc
gaagaaactctagaaatggaagaattcttggtgaatgaattcagtattccttctgattgg
atacatagaacaaaaggcagaagagctaaatttgaaaacaaaaactgggaagcttacaaa
cacatgattttgtctaaacagtggatgagtggccatgattttgctttctccaaacttatt
cctgatttaatgacgcacaacgacctttatttattagaaaaagttttagaaatcttatta
ccaggacataaaacaattatggagtggaaagtaaaggggggacttttattggacttccta
aacatatggaaattaataaacaacaagcagaaaggcgaaattgaggaatcatctttaaga
gcaattgaaattgatcttttggatctattagcgagacttaaaaagttccctataacaacc
aataaaaaagcattaagtatctcggaatgttctaagtgtattgcatttttactgaagaaa
ttttatttagaattacagaataagtcttatgctaatatttgcaaaacttcttcttatatc
gagtctctcgtaatagctccagattataaacaagatgaacttattaaatctctatttaat
atggtaaatattcaaatgattaattag
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integrated database retrieval system
