Agrilus planipennis (emerald ash borer): 108741365
Help
Entry
108741365 CDS
T07419
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln04137
Mitophagy - animal
apln04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108741365
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108741365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apln04121
]
108741365
Enzymes [BR:
apln01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
108741365
Ubiquitin system [BR:
apln04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108741365
Multi subunit type E3
ERAD complex
108741365
LMBR1L-GP78-UBAC2 complex
108741365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
G2BR
zf-RING_5
Prok-RING_4
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
108741365
NCBI-ProteinID:
XP_025831692
UniProt:
A0A7F5R6U8
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MPVILLNRLPLPNLKTYVCLSVLALSSCVYFATTVIKNPDWNKGKSGISNENETFNETDK
FSGDTRPLRQYISEIFLVMVHEAVCVWVMINMACCCLILLGRCIQKLVFDELRISEQQHL
EEKFWNFIFYKFIFVFGVINVQYMDEVLLWCSWFSLLGFLHLLSQLSKDRFEYNFQLSFS
LTTPVWNHVKLLTLLICIFALSGFMLLISTFVGFFEGLNTFAFMSAEVILLSLRTVHVIL
RYVMHLYDVFRDGSGSVSNVSSSVWEKRGPVVYYVELVFEMSAYIIDFVHHLHMLVWSNI
FLSMASLVICMQLRYLFHELQRRYKKHRNYLWVLKHMEQNYPIASPDELSQNCDNCAICW
EKMESARKLPCNHLFHTMCLQSWLEQDKSCPTCRLTLNIETPMGGRVELLPELQNDPPQP
TRRHLNHFFHFDGSRYVSWLPSFSVEVSHAQLVRPDQLVATNSQLDAMARQVQQMFPHIP
LSTIVDDLRVTRSVELTVENILEGHVVPPPIFRELDVRPTVVPMSTNSRNSPTGDSFNVD
EESSENWDELTSDNVDMEEFSGLGSRFSKSSSEREYMLHKRKEQMLRVARKKYMEKQKTK
LDSSQR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttatactactgaaccggttacctttaccaaatttaaaaacatacgtgtgctta
agtgtattggcactttcgtcatgtgtttattttgctaccacagttatcaaaaaccccgac
tggaataagggcaaaagtggaattagcaacgagaatgagactttcaatgaaacagataaa
ttttcaggagatacaaggccattacgacagtatatatccgagatatttttagtaatggtt
catgaagcagtttgtgtttgggtaatgataaacatggcatgttgttgccttatattactt
ggacgatgtatacaaaagttagtttttgacgaacttcggatttctgagcaacaacatttg
gaagagaagttttggaactttatattttacaagtttatatttgtatttggcgtgataaat
gtacaatatatggacgaagttttactctggtgctcttggttttcgctacttggtttttta
cacttactttcacaattgagcaaggacagatttgaatataattttcagttatcattttct
ttaacgacgcctgtatggaatcacgtgaaactcctgacgcttctcatatgcatcttcgca
ctgtcaggtttcatgctactgataagcacattcgtaggctttttcgagggacttaataca
tttgcattcatgtcagcagaggttattttgctgagtttacggactgtacatgtaattttg
cggtacgtcatgcacttatatgatgtgtttcgagatggttcagggtctgtaagtaatgta
tctagttctgtttgggaaaaaagaggtcccgtcgtttactacgtcgaattggtttttgaa
atgagcgcttatatcattgattttgtacaccaccttcatatgcttgtttggagcaatata
tttttatcaatggctagtttagtaatctgcatgcagcttaggtatctctttcatgagctc
caacgaagatataaaaaacacagaaattatttatgggttctaaaacatatggagcaaaat
tatcctattgcttcaccagacgaattatcacaaaattgtgacaattgtgctatatgctgg
gagaagatggaatcagctagaaaactcccatgcaaccacctgtttcatacgatgtgtttg
caatcttggctggagcaggataaatcttgtcctacttgtagattaacattgaatattgaa
actcctatgggagggcgtgtcgaactcctgccagaattacagaatgaccctccacaacct
accaggagacatttgaaccatttctttcatttcgatggttcacgatacgtatcgtggttg
cccagtttttcggtggaagtgagtcatgctcagctagtacgaccagaccaattagtggcc
actaattctcagttggacgccatggccaggcaggtgcaacaaatgtttcctcatattcct
ctttccacgatcgtagacgatttgagggtcactaggtcggtggagcttactgtggaaaac
attcttgaagggcatgtggttcctccgccaatttttcgcgaattggacgttcgcccaacg
gtggttccaatgtccactaattctagaaactctccaactggtgattcgtttaacgtcgat
gaggaatcgtctgagaattgggacgaacttacttccgataacgttgacatggaggaattt
tcgggtcttggaagtcgtttctcaaagtcgtcatccgaaagagagtacatgttacataaa
cgtaaagaacaaatgttacgcgtggctagaaagaagtacatggaaaaacagaagacgaaa
ctggattcttcccagaggtga
DBGET
integrated database retrieval system
