Agrilus planipennis (emerald ash borer): 108741398
Help
Entry
108741398 CDS
T07419
Name
(RefSeq) transcription factor SOX-9-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apln03000
]
108741398
Transcription factors [BR:
apln03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108741398
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Chordopox_A20R
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
108741398
NCBI-ProteinID:
XP_018331741
UniProt:
A0A1W4X6L7
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MLSSSNLSCATAAGVTLTATTAASVAAAAAASIQHGTTSPQRSPTSEEHSSIDKTEINEA
VTKVLKGYDWTLVPIATKASSDKRKLHVKRPMNAFMVWAQAARRKLADQYPQLHNAELSK
TLGKLWRLLSDNDKKPFVEEADRLRIIHKRKHPDYKYQPRRRKQKGPNDSIHQLPHGSNV
TFSRSLKQEESSPCSPRRHSSTSPSSCSSQPHSPSITPHTFKQCTDVSNNSIDFNRLPEF
DNTYITEDCLDSNDLDQYLPVEHGYQQNIYHDSYVIRRVSEDDESNNNNYKSKRVTSDNF
LQNGEEHSDEITSIPFVRYHELQPSSSGVKTERYPSPNTTTNVFTYQSSMPIASPTGYYT
NGSHQYLPSYQYLPQRPSTFGNHTVGSYTISGNASSEPWSHWNVPGEI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgttatcttcgtcaaatttgagttgcgcgacggcggcgggggtaactttgacggccacg
acggcggcaagcgtcgcggcggcggccgccgcgtccatccaacatggtacgacttcgccc
caaagatctccgacatcagaagaacactcgtcaatcgacaaaaccgaaattaacgaagct
gttaccaaagttttaaagggttacgattggactttagtacctatcgccaccaaagcatcg
tccgacaaaagaaaacttcacgtcaaaaggccaatgaacgcgtttatggtttgggcacag
gctgcacgtcgaaaattggcagatcaatatccacaactacacaacgccgagctatcaaaa
acgttaggaaaattatggaggttactaagcgacaacgacaaaaagccttttgttgaagaa
gcggatcgtttaaggataatccataagcgaaaacatcctgactacaagtaccaacctcgc
cgacgaaaacaaaaaggaccgaacgattctatccatcaactccctcacggttcgaacgtc
accttcagtcgatcgctcaaacaagaggagtcttctccttgcagtccgcgaaggcacagt
tcgacgtctccttcttcatgctcctctcaacctcacagtccctcaatcacaccgcacacc
ttcaaacaatgcacagacgtctcgaacaatagtatcgacttcaatcggctaccagaattt
gacaacacatacattaccgaagattgtttagacagtaacgacctggaccagtatttacca
gtcgaacacggttaccaacagaacatttaccatgacagttacgtaattagacgcgtgtca
gaagatgacgaaagtaacaacaataactacaaaagcaaaagggttacgagtgacaatttt
ctacaaaacggggaagagcattctgatgaaattacatctataccatttgttcgttaccat
gaattgcaaccgagctcatccggtgtcaagactgaaaggtacccatcgcccaatacaact
accaacgtgtttacttaccagtccagtatgccgatagcgtcacctaccggttattacact
aatggtagtcatcagtatttaccctcctaccaatatttaccccaacgtccctccacgttc
gggaaccacaccgttggtagctataccattagtggaaacgcatcttccgaaccatggagc
cactggaacgttcccggtgaaatataa
DBGET
integrated database retrieval system