Agrilus planipennis (emerald ash borer): 108741515
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Entry
108741515 CDS
T07419
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03022
Basal transcription factors
apln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108741515
09124 Replication and repair
03420 Nucleotide excision repair
108741515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apln03021
]
108741515
03400 DNA repair and recombination proteins [BR:
apln03400
]
108741515
Transcription machinery [BR:
apln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108741515
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108741515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
BBL5
Motif
Other DBs
NCBI-GeneID:
108741515
NCBI-ProteinID:
XP_018331842
UniProt:
A0A1W4XGD9
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MTTSSEEILLQVPHVRYKKGDGTLYLMDQRIAWMMENRDTVSISHHYSDIKTQKISPEGK
AKVQLQVVLHNGVSSTFHFINRNGTQAQAADRDRVKELLQTLLPKFKRKVDRELEEKNRL
LSSNPALLQLYKDLVMTEIVTSEEFWAQHASQYTKAQNTQPQEIGVSGAFLADIKPQTDG
CNGLKYNITADIIESIFKTYPAVKKKYIEHVPSKMSEAQFWTKFFQSHYFHRDRKYAESK
DLFTECGKIDDQEMKRDIQDGVKDPLVDITSFEDKSLDEGYGTEVEKLPGTFGTVSQAMI
KRFNQHSIMVLKASKNKTDQTSDQNGLQESSTSAKVKDSRPEGDEHLNKKLRIQEKITYE
DLEISNDKSDNSKIQLNLSKVERYLHGPMPGGNVEQFSPNEAAILTRAVLQETKQWQNSR
QPSNILVNPAAAVGALGELSPGGALMRGFQEQSLAQLVPADIEKEVRHLYLSLCELLSHF
WKCFPPTTPQLEQKIVKMHEAIQRFHAAKLKPFEDKLIRELSPLSHHLTKHLNQLLNASY
QKFNNWQKIKNIR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgactacgtctagtgaggaaattttactacaagtgccacacgtaaggtacaaaaagggc
gacggtaccctatatttaatggatcaaaggattgcgtggatgatggaaaatcgagatact
gtttcgatttcacatcattattcagatatcaaaacacaaaagatatctcctgaggggaaa
gccaaggttcaacttcaggtagttttgcacaatggtgtgtcctcgacttttcattttatt
aatcgtaatgggacccaagcacaagcagcagacagagatcgggttaaagaactgctacaa
acccttttgcccaagtttaagagaaaagttgatagggagctagaagaaaagaatagattg
ctatcatccaatccggccttacttcagctctataaggacttggttatgactgaaattgtt
acttctgaagagttttgggctcaacacgcctctcagtacaccaaggcgcagaacacacag
cctcaagaaattggagtctctggggcttttttggctgacattaaaccccaaacagatggc
tgcaacggtttaaagtataatataactgccgatattatcgagtctatttttaaaacatat
ccagctgttaaaaagaaatatatcgaacatgttccatcaaaaatgtcagaggcacaattc
tggaccaaattttttcagtcgcattactttcatagggaccgaaaatatgccgagagtaaa
gatttatttacagagtgtggtaaaatagatgatcaagaaatgaagagagatatacaagac
ggtgttaaagatcctctcgtcgatattacatcgtttgaagataaatcgctcgacgaaggt
tacggtacagaagtcgaaaaactacctggtacctttgggaccgtcagtcaagcaatgata
aagagatttaatcagcattctataatggtacttaaggcgtcaaaaaataaaacggaccaa
acatctgaccagaatggtcttcaagaaagttcaactagtgccaaagtgaaagatagcagg
cctgaaggtgatgagcatttaaacaaaaagttgaggattcaagagaagataacgtatgag
gacttagaaatatcaaacgataagagtgataattctaaaatacagttaaatttatcaaag
gttgaaaggtaccttcatggtccaatgccgggtggtaatgttgagcaattttcacccaat
gaagctgccatattaacgagagctgttttacaagaaacaaaacagtggcaaaattcaaga
caacctagcaatattcttgtgaatccagctgctgccgtaggcgctcttggcgaattatcg
cctggtggagccctcatgaggggttttcaggagcagtccttagctcaattggtcccagct
gatattgaaaaagaagtaagacatttgtatttgtcattgtgtgaactgttgagtcatttt
tggaaatgttttcctccaactaccccccaattagaacaaaaaatcgtcaagatgcatgag
gctattcaaagatttcatgcagccaagttaaaaccttttgaggataagttgataagggaa
ctttcccccctctcccatcatctaacaaaacatttaaaccagttacttaatgcctcttat
caaaaatttaataattggcagaagatcaagaatattagatga
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