Agrilus planipennis (emerald ash borer): 108741664
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Entry
108741664 CDS
T07419
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108741664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apln03400
]
108741664
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108741664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
108741664
NCBI-ProteinID:
XP_018332037
UniProt:
A0A1W4XGX3
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MTNLEPVHALNLDLPQQQSFVRFYESLPKKPASTVRFFSRTDYYTVHGEDAVFATQELFS
THPIKYMGETPKLSYLVLSINNFEKFIRELLLVKQYRVEIYVKPKEGKNNDWVLKYKGSP
GNLSQFEDILFENNQIAVNSCVIGVKIFKNKMLAVSCVNITEGQFQVCEFNDNEFFTELE
ALLAQVSPKEAIIPSADTGDLKNLQKVLERNGVLVVKAKKNDFNDDDFVQDLNRLLYFDE
KQQRNALAFSETSLKEAMGSLQAVVRYLNLIADEQNYNQFRLSMLDLRRYVRLDNAAVYG
LNLLPQMEQRGFSKKTNSILGMLDSCLTVQGRRLLEQWVRQPPRDMNIITERLEIVHALV
ENSEFREVLRANHLSQIPDLLILSKKMVNKKTTLRDLYRVYQAANHVPGLVNSLRKCENK
YVNAVLADPIAEFLVDMEKFQSMIEQTIDLDLVDRGEYFLKPTFDEKLGEIHDKKQRLEE
KIQKVFRRACDELNMEKGKGVKLECNDQHGYHFRVTLKEESSLRKQKSFQIIDSLNKGVR
FTNEKLSEINERYMELNKEYEDVQKNLVKEIIDVAAGYADTLRNLNHYMAKVDVLVSFAT
VAATAPIPFVKPKLLKEGSGVLRLKKVRHPCLELQDGVTFIPNDTHFKDGQKNFYIITGP
NMGGKSTYIKSVGVCVLLAHIGSLVPCAEAEISLVDCILMRVGSDDSQLKGLSTFMLEMV
ETTGLVRSATSNSLVIIDELGRGTSTYDGFGIAWAIAEHLAKEVRCFSLYATHFHEITHL
AEMIPAVHNVHVTAVTTETTITPLYQVREGVCDRSYGIHCAKMADFPRDVVEDAAKYLEE
LENSNGMKYIRDYEFSLKKKEIQEGDELINEFLSKCRQLNVSELSDEELIASVQKLKEEI
LKKNNMFVKGLMNL
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgactaatttggagcctgttcatgctcttaatttagatttgccacaacagcagagcttt
gtgagattttacgaaagtctacccaaaaaaccagcttccacagttcgattctttagtcgt
accgattattatactgttcatggggaagatgctgtgtttgctacgcaagaactattcagc
acgcatcccattaaatacatgggggaaacacccaaacttagctacctggttctgagtatt
aataatttcgaaaaattcattcgtgaacttctccttgttaaacagtacagggtagaaatc
tatgttaaacctaaagagggtaaaaataatgactgggtcttaaaatataaagggtcgcca
ggaaatctatctcaatttgaagacatacttttcgaaaataatcagatcgcagtcaacagt
tgcgttattggggttaaaatattcaaaaataagatgttagctgtaagttgtgtcaatatt
acagaaggtcaatttcaagtttgcgaatttaacgataacgaatttttcactgagcttgag
gctttgttagcccaggttagcccaaaggaggctatcattccttccgctgatacgggagac
ttaaaaaatcttcaaaaggtattagaaagaaacggagtgctggtagttaaagccaaaaaa
aatgattttaacgatgacgattttgtccaagatctaaatcgtttattatattttgacgaa
aagcagcaaagaaacgctctggcatttagcgaaacttcactgaaagaggcaatgggcagt
cttcaggccgtcgtgaggtatttgaatctcatagctgacgaacaaaattacaatcaattc
aggcttagtatgctagatcttcgtcgatatgttcgacttgataacgccgctgtgtacggt
ctaaacctgttgccccaaatggaacagagaggtttcagtaaaaagactaacagcattctt
ggcatgttagatagttgtttgacggtccaagggagaaggttgctggaacagtgggtcaga
caaccccctagagatatgaacataataactgaacgtttagaaattgtccatgctctcgtt
gagaactcagaatttcgggaagttctccgcgcaaatcatctatcccaaattcccgatctt
ttgattctttcgaaaaaaatggtgaacaaaaagacaacccttcgcgatctctatagggtg
tatcaggcggcaaaccatgttcctgggctggtgaattctcttcgaaaatgtgaaaacaaa
tacgtgaatgcggttcttgccgatcccatagccgaattcctcgtcgatatggagaagttt
cagtccatgatcgagcaaactatcgatttggatttggtggatcgtggagagtattttctt
aagcctacttttgacgaaaagttaggagaaatacacgacaaaaagcagcgactggaagaa
aagatacaaaaagtgtttaggcgcgcttgcgacgaactcaacatggaaaagggcaaaggg
gttaaattagaatgtaacgaccaacacggttatcactttagagtcactctgaaagaggaa
tcgagtttgagaaaacaaaagtctttccaaatcatcgactctcttaacaaaggagtccga
ttcacgaacgagaaactgagtgaaatcaacgaaagatacatggaattgaataaagagtac
gaggatgttcaaaagaatttggtaaaagagattatagacgttgcagctggttatgccgac
accctccgcaacctaaaccactacatggcaaaagtagatgtgttggtatcgtttgcgacg
gttgccgcaaccgcccccatacctttcgtaaaaccgaaactccttaaggaaggttcggga
gttttgcgattaaaaaaagtccggcatccgtgtctcgaactgcaagacggcgtcaccttc
ataccgaatgatacccatttcaaggacggccagaaaaacttctacatcataaccggcccg
aatatgggcggcaaaagcacttatataaaaagcgtgggggtgtgcgttcttttggcccac
ataggaagtttggtgccgtgtgcggaggccgagatatctttggtggattgtattttgatg
agggttggatcggacgattctcaattgaaggggttgtccacgtttatgctggaaatggtc
gagacgactggtctcgtcaggagtgccacatcgaattcgttagtaattatagacgagcta
ggtaggggtacgtcaacgtatgacgggtttggcattgcttgggctatagcagaacatttg
gccaaagaggttcgatgtttttccttgtatgccacccatttccacgaaataacccattta
gctgagatgataccggcggttcataatgttcatgtgaccgctgtgaccaccgaaaccacg
ataaccccgttataccaagttcgcgaaggggtgtgtgatagaagttacggtatccattgt
gccaaaatggccgattttcctcgtgatgtagtagaggatgccgcaaaatatctcgaagaa
ctcgaaaacagtaacggtatgaaatatattagggattacgagttcagtttaaaaaaaaag
gagatacaggaaggggatgaactaattaacgaatttttgagcaaatgtagacaactcaat
gtttcggaattatcggacgaagaattaatcgcttcagtacagaaattaaaagaggaaata
ctcaagaagaataacatgttcgttaaaggacttatgaatttataa
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