Agrilus planipennis (emerald ash borer): 108741705
Help
Entry
108741705 CDS
T07419
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108741705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108741705
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108741705
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108741705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
Apocytochr_F_C
Motif
Other DBs
NCBI-GeneID:
108741705
NCBI-ProteinID:
XP_018332099
UniProt:
A0A1W4X7T5
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MKIQVRLATQRVDPSVAINYRSPKIFTPGEVITVQDEFMRGHGTYEEDGYLKSSVAGVKQ
QVNKLISVRPLKSRYNGEIGDVVVGRITEVQQKRWKVDTNSRLDSVLLLSSVNLPGGELR
RRCAEDEHMMREYLQEGDLISAEVQNVHSDGSLSLHTRSLKYGKLSQGVLVKVFPSLIKR
SKTHFHNLPVGISIILGNNGFIWICPPINNEEDNVGGFVQNLEEVIPRTERETIGRLRNC
ILALAQSKMLLYDTSILYAFEESLKYSVSELLIPESMVDVAMSTQHRINMLEND
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccaggttcgattagctacgcaacgtgtggacccctctgtagctataaattac
cgatcacccaaaatatttacgccaggcgaagtgataacagtccaggatgaatttatgagg
gggcatggtacttatgaagaagatggttacttaaagtcttctgtagcaggtgttaaacag
caagtaaataaactgatatccgttcgtcctctgaaaagtcgatataatggtgaaattggc
gatgtagttgtaggtcgtattacagaagttcaacaaaaaagatggaaagttgatacaaac
tcacgattagattctgttcttctgctttcttctgttaatttaccaggaggagaactgaga
agaaggtgtgcagaagatgaacatatgatgagagaatatcttcaagaaggtgatcttata
agtgcagaagttcaaaatgtgcattctgatggttccctttctttacatacaagaagctta
aaatatggaaagctatcacaaggtgttttagtgaaagtatttccatctctaataaaaaga
agcaaaactcattttcataatctacctgtaggtattagtattatcttaggtaataatggc
ttcatttggatatgtcccccaataaataatgaggaagataatgttggtggttttgtacaa
aatttggaagaggttattcctcgtacagaaagggaaacaataggaagattaagaaattgt
attttagctttggctcaaagcaaaatgctgctgtatgatacaagcattttatatgcattt
gaggagtctttgaaatactcggtttctgaacttcttattcctgagtcaatggttgatgtt
gccatgtccacacaacatagaataaatatgttagagaatgattaa
DBGET
integrated database retrieval system