KEGG   Agrilus planipennis (emerald ash borer): 108741705
Entry
108741705         CDS       T07419                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
apln  Agrilus planipennis (emerald ash borer)
Pathway
apln03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apln00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108741705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apln03019]
    108741705
Messenger RNA biogenesis [BR:apln03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     108741705
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     108741705
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1 Apocytochr_F_C
Other DBs
NCBI-GeneID: 108741705
NCBI-ProteinID: XP_018332099
UniProt: A0A1W4X7T5
LinkDB
Position
Unknown
AA seq 294 aa
MKIQVRLATQRVDPSVAINYRSPKIFTPGEVITVQDEFMRGHGTYEEDGYLKSSVAGVKQ
QVNKLISVRPLKSRYNGEIGDVVVGRITEVQQKRWKVDTNSRLDSVLLLSSVNLPGGELR
RRCAEDEHMMREYLQEGDLISAEVQNVHSDGSLSLHTRSLKYGKLSQGVLVKVFPSLIKR
SKTHFHNLPVGISIILGNNGFIWICPPINNEEDNVGGFVQNLEEVIPRTERETIGRLRNC
ILALAQSKMLLYDTSILYAFEESLKYSVSELLIPESMVDVAMSTQHRINMLEND
NT seq 885 nt   +upstreamnt  +downstreamnt
atgaaaatccaggttcgattagctacgcaacgtgtggacccctctgtagctataaattac
cgatcacccaaaatatttacgccaggcgaagtgataacagtccaggatgaatttatgagg
gggcatggtacttatgaagaagatggttacttaaagtcttctgtagcaggtgttaaacag
caagtaaataaactgatatccgttcgtcctctgaaaagtcgatataatggtgaaattggc
gatgtagttgtaggtcgtattacagaagttcaacaaaaaagatggaaagttgatacaaac
tcacgattagattctgttcttctgctttcttctgttaatttaccaggaggagaactgaga
agaaggtgtgcagaagatgaacatatgatgagagaatatcttcaagaaggtgatcttata
agtgcagaagttcaaaatgtgcattctgatggttccctttctttacatacaagaagctta
aaatatggaaagctatcacaaggtgttttagtgaaagtatttccatctctaataaaaaga
agcaaaactcattttcataatctacctgtaggtattagtattatcttaggtaataatggc
ttcatttggatatgtcccccaataaataatgaggaagataatgttggtggttttgtacaa
aatttggaagaggttattcctcgtacagaaagggaaacaataggaagattaagaaattgt
attttagctttggctcaaagcaaaatgctgctgtatgatacaagcattttatatgcattt
gaggagtctttgaaatactcggtttctgaacttcttattcctgagtcaatggttgatgtt
gccatgtccacacaacatagaataaatatgttagagaatgattaa

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