| Entry |
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| Name |
(RefSeq) regulator of nonsense transcripts 1 homolog
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| KO |
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| Organism |
apln Agrilus planipennis (emerald ash borer)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:apln00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108741800
03015 mRNA surveillance pathway
108741800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:apln03019]
108741800
Enzymes [BR:apln01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108741800
5.6.2.5 RNA 5'-3' helicase
108741800
Messenger RNA biogenesis [BR:apln03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108741800
mRNA cycle factors
Common to processing body (P body) and stress granule
108741800
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1127 aa
MSVDAYGPSSQTLTFLDTEEADLIGADTQGSECDFTDFTLPSQTQASQHDHNNTQISNQV
IFVYAPFLWLFLFHNLVALQVNGLSSKNNAIANKIASATAALGDLQFEEDDEEFYNSKEL
PDYACKYCGIHEPNCVVMCNACKKWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGE
TILECYSCGVRNVFVLGFIPAKADSVVVLLCRQPCAAQNSLKDMNWEQEQWKPLISDRCF
LTWLVKIPSEQEQLRARQITAQQINKLEELWKENVDATFQDLEKPGVDEEPQQVLLRYED
GYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFTLAKQDGDMKLMH
GDELRLRYVGEMHKAWSGVGHVIKVPDNYGEDIGIELKNGIGAPTDCHSNFVVDFIWKST
SFDRMQLALRKFAVDDSSVSAYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYA
VKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHRTN
LKVVRLCAKSREAIDSPVSFLALHNQIRKMETNTELQKLQQLKDETGELSSVDEKRYRML
KKCAEKELLEAADVICCTCVGAGDPRLVRLKFHSILIDESMQATEPECMVPVVLGVKQLI
LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYE
GSLQNGVCADERKLAKVDFPWPVIDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKIAT
RFLKSGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHNRLYQEIEVASVDAFQGREKDIII
MSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIAGNPKVLSKQPLWNHLLAFYKEQKVL
VEGPLANLKESLIQFAKPKKLINSENPGSHFMSTSMFDAREAMVPGSVYDRTNSSVNGGN
QFNYQRGAVPLDMFSRTHDPISYISPERAQAALSNLPVPVGMFMNMAHIPPRFFNQHQQA
LQARQAQAQNSRARKAPVRQKNYRGLSQEHTQPFSQTLQLTQGMSQPGLSQAGFSLSQPG
LSQPELSQDPYMNEYQSQMDGLLSQDSTYQGDRSAFYQPNAQFSQPY |
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| NT seq |
3384 nt +upstreamnt +downstreamnt
atgagtgttgatgcatatggtccaagttcccaaaccctcacatttttggacacagaggaa
gctgacttaataggagctgatacccaaggatcagagtgcgatttcacggattttacacta
ccatctcaaacccaagcctcccagcatgatcataacaacacacaaatttcaaatcaggta
atatttgtttatgcacctttcttgtggttatttttatttcacaaccttgtggctttacag
gtcaatggactttccagcaaaaataatgcaattgcaaacaaaatagcttcagctactgct
gcactaggagatttacagtttgaagaggatgatgaagaattttacaatagcaaagagctt
cctgattatgcctgtaaatactgtggaattcatgagccaaattgtgtggttatgtgcaat
gcctgcaaaaagtggttctgcaatggaagaggaaacacttctggaagtcacatcattaat
catttggttcgtgcaaagcataaagaagtcactttacataaagatggacctcttggggaa
acaatacttgaatgctacagttgtggagttcgtaatgtctttgtcttgggttttattcct
gcaaaagcagattctgtagtagtgttactatgcagacagccatgtgctgcacaaaattca
ttaaaggacatgaattgggaacaggagcagtggaaacctttaatatccgaccgttgtttt
ctgacttggcttgtaaaaataccctctgaacaagaacagctgagagctagacaaataact
gctcaacaaatcaataagttggaggagttatggaaggagaatgtggatgcgacattccaa
gacttagagaaacctggagtcgatgaagagccccaacaggttttacttcgttatgaagat
ggttatcaataccagaatatatttggtcctttggttaaattagaggcagattacgacaaa
agattaaaggagtcccaaacccaggaaaacatcgaagttcgctgggacgtcggtttgaac
aagaaaactattgcttactttactttagcaaaacaagatggagacatgaaactgatgcat
ggcgacgaactacgtctgcgttacgtgggggagatgcacaaggcctggtcgggagtggga
cacgttattaaagtacccgataactatggtgaagacatcggcatagagctgaagaatggt
atcggagccccaaccgattgccacagcaattttgtcgttgattttatatggaaaagcacc
agttttgacagaatgcaattagctctcagaaaatttgcagtggatgactcatctgtgtct
gcatacatctaccatcggctcctgggacacgaagtggaagaagttcttttccgttgtcat
cttcccaagcacttttcagcccctaatttgcctgacttaaaccgttcccaggtatatgcg
gtcaagcatgccctccagagacctctgtcactcatacaaggaccacctggtactggtaag
acggtgacttctgccacaatcgtttaccagctcgtaaaacaaaacggagggcctgtactg
gtttgtgctccaagtaatactgcagttgaccagctgacggaaaaaatacacagaactaat
ctgaaggtggttcgattatgtgcaaaatctagagaggcaattgattcccctgtaagtttc
cttgctctccacaaccaaatacgtaagatggaaacaaacacagagttacaaaaattacaa
caattaaaagacgagacaggagagctcagctcagtcgatgaaaaacgttaccgtatgtta
aagaaatgtgcagaaaaagaacttttagaggctgcagacgtgatttgttgcacttgcgtg
ggagcaggggatccccgactggtacgtttgaagttccattcgatccttatagatgaaagc
atgcaagctacagagccagagtgtatggtccccgtggtattgggtgttaagcagcttata
cttgtcggggatcattgtcagttgggaccggttgtaatgtgcaaaaaggctgcaagagcg
gggttgtcccagagcctgtttgaaagattggtagtacttggtataagaccatttagactt
gaagtccaatatcgtatgcacccagaactgtcccgattcccgtctaacttcttttacgag
ggtagtctgcaaaacggagtatgcgcagatgaaagaaaacttgccaaggtagacttccca
tggccagttatcgaccgccccatgtttttctatgtcactcaaggacaagaagaaatagct
ggctctggtacgagctacttaaacaggaccgaggctgctaatgtggaaaaaatcgccaca
aggttcttgaaatcgggaataaaacctgaacagatagggattataacaccgtacgaaggt
cagagggcgtatttagtgcagtatatgcagtaccaaggttcgcttcacaaccgattgtac
caagagattgaagttgcgagtgtggacgcattccagggtcgtgaaaaagacattatcata
atgtcttgcgttcgttcaaacgagcatcaaggcattgggtttctgaacgaccccaggcgt
cttaacgtagcccttacacgagccaaatacggaattatcattgcgggtaatccaaaggtt
ttatccaaacagccattatggaatcatctgttggccttctacaaggaacagaaagttcta
gtggaggggccacttgcaaatttgaaagagtctttaatccaatttgccaaacccaagaag
ctcatcaattctgaaaatccaggttctcattttatgagcacttctatgtttgacgcacgc
gaagctatggtgccaggttcggtttacgatcgcaccaattcttctgttaatggcggaaat
cagttcaactaccaaaggggcgctgtaccattggacatgttcagtcgcacccatgatcct
atcagttatatctcaccagaaagagcccaagcggccttgagcaatcttcccgtaccagtg
ggcatgtttatgaatatggcgcacatcccacctcgtttcttcaaccaacatcagcaggca
ttacaggctcgtcaggcgcaagctcaaaacagtcgagcccgcaaggctcccgtacgtcaa
aagaactaccgcggccttagtcaagaacacacgcagcccttcagccaaactttgcaatta
acccaaggaatgtcccagcctgggttgtcccaagcaggttttagcctttcacagccggga
ctttcgcaaccagaattgagtcaagatccgtacatgaacgagtaccagtcgcaaatggac
ggcctgttgtcccaggattcgacctaccagggagacagatcggcattctaccagccaaac
gcccaattctcgcagccctactga |
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