Agrilus planipennis (emerald ash borer): 108742804
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Entry
108742804 CDS
T07419
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03013
Nucleocytoplasmic transport
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108742804
03015 mRNA surveillance pathway
108742804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108742804
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108742804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
108742804
NCBI-ProteinID:
XP_018333635
UniProt:
A0A1W4XMM4
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MSTENVNLEELEDKGNLVDETPDSEVKETEECENDNNSKTSCSNCTSVDSDDGVEFEREE
GDGQEGTPFDRVDDDEDKKNPQYIPKKGTFYEHDDRTVEAEEPENNTEKGEKVGRKTMWI
DKKDHWSHDKYNDTEQAPKSKSELIAVYGYDIRNEDGPPKARRRRRYGRGPSKYTRNWED
EDAYKLSRPEKKTPKKPSHRKKQLSDFVPINKNASEQELKILNSTEATEISILSKEETKV
NPNLSNNNTFLKSSEKTISKKQFNQNKNNHQQISERDYSSGQGSQKKIEDSDYKGFTRSR
QYRSVKSEQKILPKTVDRQVVRSQSFSNRSASDDVEASANLLSRMNINDGGNSNSKNIKS
NRQINKPPRLQSEQKGSKRYSSLRQRSLPETSSSPNFYPNEFTHQRSQQASAVVLSHTNS
VPIEHVTPAPLQPISQQISVPNPPLLQTQSHYVTPFPPGPPPFLQSSVAQQTFIPAQPSA
ALINYVPGQPQFSHPQTGPFEGFQAQQFNAVTQQPELCQYQGGTTYYSTQNQHVPQRSAT
TRRPKAAIPIIPPPQDSRGRGRSVNVNQKSLISSSLEDTPKATDETVEHYENVSDELKE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaaaatgttaatcttgaagaacttgaggataaaggaaatcttgtggacgaa
actccagattccgaagtaaaagaaactgaagaatgcgagaatgataacaattctaagact
tcctgttcaaattgtacatccgttgatagtgacgatggtgtggaatttgagagagaagag
ggggatggtcaggaaggtacaccatttgacagagtagatgacgatgaggataagaaaaat
ccacaatatatccctaaaaagggtacattttatgaacacgatgatagaacagtggaagct
gaagaacctgaaaataatacagaaaaaggtgaaaaagtaggaaggaagaccatgtggatt
gataagaaagatcactggagccatgacaaatacaacgatactgaacaagcacctaaatcc
aagtcagaattaattgctgtttatgggtatgatataagaaatgaagatggtccacctaaa
gcaagaagaagaagaagatatggacgtggtcctagtaaatatactcgaaactgggaagat
gaagatgcatataagctttcaagacctgaaaagaaaacaccaaaaaagccaagtcatcga
aagaaacaattatctgactttgttccaattaataaaaatgctagtgaacaggaattgaaa
atcctaaattcaacagaagctactgaaatttcaatcttaagtaaagaagaaacgaaggta
aatccgaatctctcgaataataatacttttctaaaatcgtctgagaaaacgatttctaaa
aaacaatttaatcaaaataaaaacaatcatcaacaaatttccgaacgggattactcgtct
gggcaaggatctcaaaaaaaaattgaagattctgattataaaggattcactaggtctcgt
caatatcgcagcgttaaatcagagcaaaagatcttacccaaaacggtcgatcgacaagtg
gttcgttcgcaaagtttcagcaacagaagtgcttctgacgatgtggaagctagcgcgaat
cttttgagcagaatgaatataaacgatggaggaaacagtaacagtaaaaatattaaatca
aatagacaaatcaataagccaccacgtttgcaaagtgaacagaaaggatcaaaaagatat
agttccttgagacaaaggtcattgcctgaaacgtcgtcttcgcccaatttttacccaaac
gagttcacacatcaacgttctcaacaggcttcagcggtagttctatctcatacaaattcg
gttcccatagaacacgtaactcccgcacctcttcagcctatttcccaacaaatttctgta
cccaatcctcctctccttcaaacacagtcgcactacgtgacacctttccctcccggaccg
cctcctttccttcagtcttccgtcgcccaacaaacgtttataccggctcaaccctctgct
gctttaattaactacgttccaggacagcctcagttctctcatcctcaaactggacccttt
gaaggatttcaagcgcagcagtttaatgcagtgacacaacaacctgaactatgtcagtat
cagggcggaactacctattattcaacacagaaccaacatgttccacaaagatcggctaca
accagacgcccgaaagcagctatccctataattccaccacctcaagattcgagaggaagg
ggaagaagtgtaaatgttaatcagaaatcattaatttcgtcatctctggaagatactcct
aaagcaacagacgaaacggtggagcattatgaaaacgtttctgacgaacttaaagagtaa
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