Agrilus planipennis (emerald ash borer): 108743086
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Entry
108743086 CDS
T07419
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108743086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apln03009
]
108743086
Ribosome biogenesis [BR:
apln03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108743086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
NBCH_WD40
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
eIF2A
WD40_like
Beta-prop_VPS8
Beta-prop_RIG_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
108743086
NCBI-ProteinID:
XP_018334010
UniProt:
A0A1W4XNP5
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MVQGSKVFAPHRCLGYVSNHIPLQLRYIKNRKEHLIVTCAGKFFLTYGISHFSLLSVSGI
HPSDITCMTSDTYHIYTACENVIYAWRRGTELKHVYRGHAKSVHLMLPFGIHLISIDEGN
KVKVWDIINENVLLELLFPIQSFKISAVAHPKTYINKILFGSKQGSMQLWNVNNSKLIYS
FKGWDSSITCLEQAPALDVVAVGLASGKIILHNLKYDETVMEFVQDWGLVTSITFRTDGH
PIMATGSTNGHIVFWNLEDQKVASQLVSAHEGAVTGMICVPNEPLILTSSPDNTLKLWIF
DMTDGSARLLRIREGHSSASTCIRFHGSNGHNILSAGNDSSLRIFNTQTEQFNKSLGVAS
YNRKVSKKRKKNAEDSLRMPPIVFFASETTREKEWDGIAAIHSGLPLVTTWSYNKKKMGD
YKLLPERLHKKKLKTECSVTATCLTLTKCGNFVIVGYTDGYVDRFNIQSGMWRTSYGNPS
AHDTTVRGTAVDSLNNVVITGGSDAKIKFWTFNGKETTPLRTLSIEESINFIRSHPESSL
ISVTTDFFSILVIDVSSKSIVRKFWGHKAQITDATFSPDSRWLITSAMDCTIKTWDIPSS
QLIDHFKTEVPCISLSMSPTGEFLATVHLDNLGVFLWSNRSIYSRVSLKNLSPSDEPPLM
MLPEIINEGIKVEDDDEDEDELNKEFISKCQISDELVTLSELRNSRWQNIFNMDIIKQKN
KPKEAPKVFKSAPFFLPTVASLTPKFDFSKNNENKEQGNVITLDKNFHTFSPFGELLDKT
KELNNFENVVETLKSMAPSMIDFEIKLLDPDVGGTVDVMVQFLKCIEHMLNSNNNFELAQ
AYLATFLKQHFKTVMVEPKLVSMLPTLQNCHSSTWNRVQDRMLYSLCVVQALKLFDQ
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggttcagggaagtaaagtgtttgcaccccatcgttgtttaggttatgttagtaatcac
attcctttacaactacgatacattaaaaataggaaggaacatttgattgtgacttgtgcc
ggtaaattcttccttacttacggaattagccactttagtttactcagtgttagtggaatt
catccatctgatattacttgtatgacttctgatacatatcatatatacacagcttgtgaa
aatgttatttatgcatggagacgtggtacagaattgaaacatgtttataggggccatgca
aaatcggttcatcttatgctacctttcggaattcatttaatttcaattgacgaaggaaat
aaagtcaaagtttgggatattataaacgaaaatgtccttttggaattactatttcctatt
caatcattcaaaataagtgcagttgctcatccaaaaacatacattaataaaatccttttc
ggaagcaaacagggttcaatgcaattgtggaatgtgaacaacagtaaactaatatactcc
tttaaaggctgggactctagtattacatgtttagagcaggctccagcattagatgtagtt
gctgttggattggcatcaggaaaaattatcttacataatttaaaatatgatgaaacagtg
atggaatttgtccaggattggggtttagtcaccagtataacattccgtactgatggacat
cctattatggcaacaggcagtacaaatggacatattgtattttggaaccttgaagatcaa
aaagtggcttcacaattagtttcagcccatgaaggagcagtgactgggatgatttgtgtg
ccaaatgagcccctgattcttacatcttcacctgacaatacactaaaactttggatattt
gatatgacagatggaagtgcaagactcttaagaataagagaaggtcactcatctgcttca
acatgtattcgttttcatggctcaaacggtcataatatcttgagtgcaggaaatgattca
agtcttagaattttcaatacccaaactgagcagttcaataaaagtttaggtgtagcgtca
tataatcgcaaagttagtaaaaaaagaaaaaaaaacgctgaagactctttaagaatgcca
ccaatagtgttttttgcttctgaaaccacaagagaaaaggaatgggatggaattgctgca
atacattctggcttgcctttggttacaacgtggtcatataataagaaaaagatgggagat
tacaagttacttccagaaaggttacataaaaagaagttgaagacagaatgttcagtaact
gccacttgtttgactctaacaaaatgtggaaattttgttatagtaggatacactgacgga
tatgtagacaggtttaatattcagtctgggatgtggagaacttcttatggaaatccttca
gctcatgatactactgttaggggcacagctgtggattcactgaataatgtcgttataaca
ggcggcagtgacgcaaaaattaaattttggacttttaatgggaaagagactacaccgtta
cgaactttatctatcgaagaatcaataaattttataagatctcatcctgaaagttcattg
atttctgtaaccacagattttttctctattttggttattgacgtatcatcgaaatcaata
gttagaaagttctggggccacaaagctcaaattacggatgcaacttttagccctgactcg
cgttggcttataacttctgcaatggactgtacaattaagacttgggacataccatcttct
caattaatagaccatttcaaaacagaagtaccctgtatatcgttgtcgatgtctcctaca
ggagaatttctggctacagttcacttagataatttaggagtgtttttgtggagtaatcga
agtatttattctcgcgtttctctaaaaaacttatctcccagtgacgagcctcccctcatg
atgcttccagaaataattaatgaaggtattaaggtggaagatgatgacgaagatgaggat
gaattaaacaaagaattcatttctaagtgtcaaatatcggatgagttggtgactctttca
gaattacgaaactctcgttggcaaaatatctttaatatggacataattaagcagaaaaat
aaaccgaaagaagctccaaaagtgttcaaatctgcaccgttctttttaccaactgtagct
tccttgacccctaagttcgatttttcgaaaaataatgaaaacaaagagcagggcaacgtg
ataacgctcgataaaaatttccatacattttctccgtttggggaacttttagataagaca
aaagagctgaataattttgaaaatgttgtcgaaacactcaagtcaatggctccgagtatg
atagatttcgaaattaaattgctggatccagatgtaggaggaacagtagatgttatggta
caatttttaaaatgtatagaacacatgttaaattccaataacaattttgaattggctcaa
gcatatttggctacgttcttgaaacagcattttaaaactgttatggtagaacctaaactt
gttagtatgttacctacacttcagaattgccattctagtacttggaaccgtgtgcaagat
agaatgttgtatagtctttgtgttgttcaagcgttaaaattgtttgatcaataa
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integrated database retrieval system