Agrilus planipennis (emerald ash borer): 108743356
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Entry
108743356 CDS
T07419
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108743356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apln03021
]
108743356
03019 Messenger RNA biogenesis [BR:
apln03019
]
108743356
Transcription machinery [BR:
apln03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108743356
RNA polymerase I system
108743356
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
108743356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW6_SPT5
KOW
KOW5_SPT5
Spt5-NGN
KOW2_Spt5
KOW7_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
108743356
NCBI-ProteinID:
XP_025834253
UniProt:
A0A7F5RE52
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MSDSEASNFSDNEAASGSEPGSPASQRSQRSSRAGSARSRSVSRSRSRSKSRSRSRSGSE
AREASEQEDVEEEQEPEGDSLHDSEEYDSEEDESDSGHRRKRKKKDRYGGFIIDEAEVDD
EVEDEDDWEEDAQEIGIVGNEIDEVGPTAREIEIRRRGTNLWDSQKEHEIEEYLRKKYAD
DGAAARHFGEGGEDMSDEITQQTLLPGVKDPNLWMVKCRIGEEKSTCLLLMRKFLAYQNT
NEPLQIKSVVAPEGVKGYIYIEAYKQPHVKAVIENVGNLRMGVWTQQMVPIKEMTDVLRV
VKEQTGLKSKQWVRLKRGLYKDDIAQVDYFDMAQNQVHLKLLPRIDYTRPRGALRTTQSE
TDANKRKLKRRPPSKPFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTLSAVII
DGVKPTLAELERFEEQPEGIDLEIAADKEDKTSTHSFSAGDNVEVSEGELINLQGKILTI
DGNMITVMPKHEDLKDPLVFQASELRKYFRMGDHVKVLSGRYEGDTGLVVRVENNRVVLI
SDLTMHEMEILPKDLQLCTDMASGVDSLGKFEWGDLVNLDSETVGVIVRLERENFHVLNM
HGKVVECRPSSLQKRRLNRFTAALDSYRNNLHRKDMVKVIDGPHSGFSGEIKHLYRNFAF
LHSLEYLQNGGIFVCKTKHLQLAGGSKSVPNADIATGMEFMSPRRSSPMHPSSGGFGGPR
GGGGGRGRVARDRDLIGSTIKITRGPYKGNIGIVKDATQSTARIELHTSCQTISVDRSHI
ADVGTPSRDGSITSYGRTPAYTGNQTPLYRESGSKTPMADSGSRTPLHYGSMTPIHDGSR
TPNAHSEWDPSVSNTYPSPGYNPSTPAYQMNGPYTPQTPGTIYDTGYSPYQPSPGYQSVV
STPSPATGYSQSPASNNPYNTPSSGYSPNMPYNPQTPGAGLDSSSMAEWHTVDIEVIIRD
SHDDPGLVGQTGIIRSISGSMCSVFLPEEDRVVNIMSNHLDPVRPQRGDAFKVIIGEERE
ATGELLSIDLHEGVVKIKTDIKLMPLSSLCKMRKPDH
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcggaggctagtaatttttctgacaacgaggctgcatcaggatcagaacca
ggttctcctgcgtctcagcggtctcaacgaagtagtcgtgctggaagtgctcgaagtaga
tctgtctctcgttctcgatccaggtcaaaatcgcgaagtagaagtagatcaggttcagaa
gcaagagaagcttcagaacaggaagatgtagaggaagaacaagaaccagagggtgactcc
cttcatgacagtgaagaatatgatagtgaagaagatgaaagtgattcagggcatagacgt
aaaagaaagaagaaagatagatatggtggttttattattgatgaagctgaggtggatgat
gaagttgaagatgaggatgactgggaagaggatgctcaagaaattggaattgtgggaaat
gaaattgatgaagtgggcccaacagccagagaaattgaaattcgcaggaggggaacaaat
ttgtgggattcccagaaagaacatgaaattgaagaataccttcgtaaaaaatatgctgat
gatggagcagctgcaagacattttggagagggtggtgaggacatgtcagatgaaatcaca
cagcagactttacttcctggagtcaaggacccaaacctgtggatggtaaaatgtcgaatt
ggagaagaaaagtccacctgtctcttactcatgcgtaaattccttgcttatcaaaataca
aatgagcctttgcaaataaaatcggtcgtcgctcccgaaggggtaaaaggctacatttac
atcgaagcttataaacagccccatgtcaaggcagtcatagaaaacgtgggcaatctccgt
atgggcgtctggacgcaacaaatggttcccataaaggagatgacagacgtcttacgagtc
gtcaaagaacagactggcctcaaatcgaagcaatgggttcgtttgaaacgaggactctat
aaagatgacatcgcccaagtcgattattttgatatggcccaaaatcaagtgcatctgaaa
ttattgcctagaatcgattatacaaggccccgaggggctctacgtaccactcaatcagag
acagatgctaataaacgaaaacttaaaagacgaccccccagtaaaccatttgatcctgaa
gctataagggctattgggggcgaagtaacgtctgatggcgactttctcatctttgagggc
aacagatattctcgtaaaggatttctctacaagaattttaccctcagtgcagtgattatt
gatggagttaaacctactttggctgaactggaaaggtttgaggaacaaccagaaggcata
gacctcgaaatagcggcagataaggaagacaagacgtcaacacattcatttagtgccgga
gataacgttgaagtgtccgagggcgaattgattaatttacaaggaaaaattttgaccata
gatggaaatatgattacggtaatgccaaaacacgaagatctaaaagacccgttagtgttc
caagcgtcagaattaagaaagtatttcaggatgggagatcacgttaaagttctgtccggt
cgttatgagggtgatacaggtttggtggtgagggtagaaaacaatcgtgtagttttgata
tccgacttgaccatgcacgagatggaaatattaccaaaggatctacagttatgcactgac
atggccagtggagttgattcgctgggaaaattcgagtggggagatttggttaatttggac
tctgaaaccgttggagtaatcgttagattggaacgagaaaatttccatgttctaaatatg
cacggaaaagtggtggaatgtcgccccagttcgcttcaaaaacgccgtttgaaccgtttc
acagctgctctagactcgtaccgtaacaatctccatcgtaaagatatggtaaaagtaatc
gatggacctcattctggattttcaggagaaattaagcacctgtacaggaattttgctttc
ttacattctcttgaatatcttcagaacggtggcatctttgtgtgtaaaaccaaacattta
caattggccggtggaagcaaaagcgttcctaacgctgacattgcaaccggaatggaattt
atgtcaccaaggagaagttctcctatgcatccttcaagtggcggatttggaggtcctcga
ggaggtggtggaggtagaggtcgcgtggcccgtgacagagacctcattggttctacaatc
aagattacaagaggtccatacaaaggcaacatcggtattgtaaaggatgctactcaaagc
acagctcgtatcgaattgcacacctcatgtcaaactatttcagtcgatagaagtcacata
gcagatgttggtactcccagtagagatggtagcattacgagttatggtaggaccccagca
tacactggaaatcaaactccattgtacagagagagtggaagcaaaactcccatggcagat
tcaggctctcgcactcctctccattatggctccatgacacctatccacgatggttccagg
actcctaacgctcattccgaatgggatccttctgtatccaacacttatccttctccagga
tataatcctagtacccctgcgtatcaaatgaatggtccttacaccccacagacaccagga
accatttatgacacaggatatagcccctatcaacccagtccagggtatcagagtgttgtt
tctacgccaagtcccgcaactggatacagtcaatcgcctgcaagtaacaatccctacaac
actcccagttctggatacagccccaacatgccttacaatcctcagacaccaggagcaggc
ttggactcctcgtcaatggccgagtggcacactgtggacattgaggtgataatacgtgac
agtcatgatgatccgggcttagtagggcaaacaggaataattcgtagtatttctggatca
atgtgttctgtatttttgcctgaagaagatcgtgtcgtgaatataatgagtaaccactta
gatccagttagaccacaacgtggagatgcatttaaagtaattatcggggaagaaagagaa
gctacaggagagctgctgtctattgatttgcatgaaggggttgtgaaaataaagactgac
atcaaattaatgcccctttcaagtttatgtaaaatgagaaagccagatcattaa
DBGET
integrated database retrieval system
