Agrilus planipennis (emerald ash borer): 108743476
Help
Entry
108743476 CDS
T07419
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108743476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108743476
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108743476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Nucleoporin_FG
CTD
Motif
Other DBs
NCBI-GeneID:
108743476
NCBI-ProteinID:
XP_018334556
UniProt:
A0A1W4XEW7
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSFGFGSSGQSAFGSTPNKPTAFAAPLSFGTPATTTASAGFGSFGSSFGTPSQQPTFGST
FGQQTATPSFGQPNATPAFGQSSIAPAFGQQTATPAFGQQAAAPVFGQQQVSAPAFGQQS
ATPAFGQQTATVGFGQPSATPSFGQPSAAPAFGQQSTAPAFGSTFGQSGTAAPAFGQAAS
TTPAFGSTFGATATSAPAFGGTFGAPATSTPSLFGSLQTSKPSLFSTPAASTTPSLFGTA
TTTAGGLFGSTSAPTGGLFGTTTTTQAPSLFGSIATSTPSLFGTSSTAPPLFGSATQPAG
GGLFGTATTTQPSLFGSASAPQFSLGSGTTAATTTTSTGFSFFGPTTTSAPSLFGSLGTT
TTTQSGFGGFGTTFPGFGTTASVTPFGTTAFGQKPLTAPGQTAAPVDKNQQVLASIYAIN
VFGDERDNVLKKWNMLQACWGTGKGYYSQHQPPIEYDHSNQFYRFKAVGYTVIPNAENSE
GLVKLTFNKKESELMNQKDVLIKGLSGILGNKPNLTVEIETIKNLDGNRTEVTVIVSEKG
ATGQTRKIPASDLSSFLNQPMNKQQLTNVGVTSIFPYVTPTKAQIEEYLKNPGQGVDPTM
WQMAQIDNPNPNKYLPTVINGFADLKRRMLTQEYETGLHRAFLAKVIREIKEVKSKHTAS
LAQIAEMKQKFLALQHRTLRILVKQECTRKVGMALQPEEEMLRARLEAMHAQLGIPNQYR
GLLNELLSYVKLTGGFVIPKENYRIDSSALDDIKQFLRMQQNGISQLVNIINLDLQALKT
INDGLKDLSKYQPKI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcggttttggaagttctggtcaatctgcatttggtagtacaccaaataaacct
acagcatttgctgctcccttatcttttgggacaccagctaccacaactgcttccgctgga
ttcggtagttttggatcttcttttggaacgccctctcaacagccaacctttggtagtaca
tttggtcaacagactgcaacaccatcctttggacaaccaaacgccacccctgctttcgga
cagtcgagtatagcccccgcgtttggacaacagaccgccactccagcctttggtcaacaa
gcagcagctcctgtttttgggcagcagcaagtttcagccccggcttttggtcaacagagt
gcaactcctgcttttggtcaacaaaccgctactgttggcttcggtcaaccgagtgcaaca
ccctcttttggtcagccaagtgccgctccagcgtttgggcagcaaagtacagctccagcg
tttggaagcacttttgggcagtcgggaacagctgctcctgcctttggtcaagccgcaagc
accactccagcattcggtagcacatttggggctacggctacatcggcacctgcatttggg
ggtactttcggagctccggctactagtactcccagtctttttggatctttacaaactagt
aagccgtctctcttcagcactccagcagcatcaacgactccttctctgtttggaacagca
accactacggcaggaggattgtttggtagtacttcggcccctacaggaggtctttttggt
acaactacaaccacccaagcgccaagtttatttggatcaattgcaacttctaccccgagc
ctgtttggcacttcgtcgactgcacctccgttgtttggttctgctactcagccagctggt
ggcggactttttggtactgcgaccacaacacaaccgtcgctttttggatccgcatcagca
ccgcaatttagccttggatcgggtacaacagctgcaactaccacaacatctactggcttc
agcttttttggccctacaactacatcagctccaagtttatttggcagtttaggtacaact
acaacaacacaatcaggttttggaggattcggaaccacctttcctggttttggtacaact
gcatctgttactccttttggaactacagcatttggtcaaaaaccactcactgctccagga
caaactgctgccccagtggataagaatcaacaggtactagcctctatatatgcgataaac
gtgtttggagatgagcgagataatgtgttaaaaaaatggaacatgctacaagcttgttgg
ggcactgggaaaggctactacagtcagcatcagcctcccatagagtatgaccattcaaat
cagttctacagatttaaagcagtcggttatactgtgatacccaatgctgaaaattcagag
ggactagtaaaattaacatttaataaaaaggaatcagaattgatgaatcaaaaagatgta
cttattaaaggattatcaggaatattaggaaataaaccgaatttaacggttgaaattgaa
acaataaaaaatctagatggtaatcgaactgaggtgacagtaatcgtttctgagaagggg
gcaaccggtcaaactcgaaaaattccagccagtgacttgtcctcgttcttaaatcaacct
atgaacaaacaacaattaactaatgtgggggttaccagtatttttccttatgtaactcca
acaaaggcgcagatcgaagagtacttgaaaaatcctggacaaggggttgatcccacaatg
tggcaaatggcgcaaattgacaacccaaatccaaataagtatctgcctactgtaataaat
ggttttgcagaccttaagagacgaatgttaacccaggaatacgaaacaggtttgcatcgt
gcctttttagctaaagttattcgtgaaattaaggaagtaaagagcaaacataccgcgtct
ttggcgcaaatagccgaaatgaaacaaaagttccttgccctacaacatagaacattaagg
atattggttaagcaagaatgtaccagaaaagttggaatggcccttcagcctgaggaagaa
atgctaagggctagattggaagctatgcatgctcaattgggaattccaaaccagtacagg
ggacttctgaacgaacttttgtcatatgttaaattaaccggtggttttgttattccaaaa
gaaaactacagaattgatagttctgcgcttgatgatattaaacagttccttagaatgcaa
cagaatggtataagtcagttagttaatatcattaatttagacttgcaagcactcaaaaca
ataaacgatgggttaaaggacttatcgaaatatcaacctaaaatttaa
DBGET
integrated database retrieval system
