Agrilus planipennis (emerald ash borer): 108743689
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Entry
108743689 CDS
T07419
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108743689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108743689
03041 Spliceosome [BR:
apln03041
]
108743689
03032 DNA replication proteins [BR:
apln03032
]
108743689
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
108743689
Spliceosome [BR:
apln03041
]
Complex A
U1 snRNP components
Sm proteins
108743689
U2 snRNP components
108743689
Complex B
U1 snRNP components
108743689
U4/U6.U5 tri-snRNP components
108743689
Complex C
U2 snRNP components
108743689
DNA replication proteins [BR:
apln03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
108743689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108743689
NCBI-ProteinID:
XP_018334774
UniProt:
A0A1W4XFJ3
LinkDB
All DBs
Position
Unknown
AA seq
135 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMAQITVTYRDGRVAQLEN
VYIRGSKIRFLILPDMLKNAPMFKKQTKAGTAGRGKSAILRAQAARGRGRGVNPAMRGRG
TWQGPGQGIPGRGGR
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgtctattggtgtgccaattaaagttttacacgaagccgaaggacatatcgtaacttgt
gaaacgattaccggcgaagtatacagaggaaaactcattgaagctgaagataacatgaat
tgccaaatggctcagataacagtgacttacagagacggaagagttgctcagttagaaaat
gtatacattcgtggttcaaagattcgatttcttatattgccagatatgttaaaaaatgcc
ccaatgtttaagaagcaaacaaaagccggtactgcaggtagaggaaaatcggcgattcta
agggcccaagctgcaagaggaagaggtcgaggggtaaatccagctatgagaggtaggggt
acttggcaaggccccggtcaaggaattccaggcagaggaggaagataa
DBGET
integrated database retrieval system
