KEGG   Agrilus planipennis (emerald ash borer): 108744421
Entry
108744421         CDS       T07419                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
apln  Agrilus planipennis (emerald ash borer)
Pathway
apln03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apln00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108744421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apln03019]
    108744421
Messenger RNA biogenesis [BR:apln03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     108744421
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     108744421
SSDB
Motif
Pfam: ECR1_N EXOSC1 ECR1_N_2 RRP4_S1
Other DBs
NCBI-GeneID: 108744421
NCBI-ProteinID: XP_018335674
UniProt: A0A1W4XTC0
LinkDB
Position
Unknown
AA seq 199 aa
MPENLLVCVPGQRLCLSDKSHIAGQGTYERGGYIYSTLAGLVDVVDNEGVKVIEVHSCGE
QTLVPAQGDIVTAQVTIITQQSCKCIIKCIGDTVLSRPHRAILRREDIRATEKDRVEVYK
CFRPGDIILARVLPITEAHSYQLSTAENELGVVMAHSENGHPMVPISWTEMQCVKTFVKA
PRKVAKVVPENFKMDSDET
NT seq 600 nt   +upstreamnt  +downstreamnt
atgccagaaaatttattagtttgtgttcctggacaaagactttgtctttcagataaaagt
catattgctggacagggaacttatgaaagagggggctacatatattctacattggctggt
ttggttgatgttgttgataatgaaggggtgaaagtaatagaagtccatagttgtggagaa
caaacattggtacctgcacagggagatattgttactgctcaggttacaattataactcag
cagtcatgtaaatgtattataaaatgtattggggataccgttttaagcagacctcatcgt
gcaattttgagaagggaagacattagagctacagaaaaagaccgtgttgaagtatataaa
tgtttcaggccaggtgatataattctagcaagagttcttcctataacagaggcacattcc
tatcagctctcaactgctgaaaatgaattgggggttgttatggcccattcagaaaatggc
catcccatggtacccattagctggacagaaatgcagtgcgtgaaaacatttgtcaaagct
cctagaaaagtagcaaaagtggttccagaaaattttaaaatggattcagatgaaacatga

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