Agrilus planipennis (emerald ash borer): 108744526 Help Entry 108744526         CDS       T07419                                  Name (RefSeq) exosome RNA helicase MTR4   KO K12598   ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] Organism apln  Agrilus planipennis (emerald ash borer) Pathway apln03018   RNA degradation Brite KEGG Orthology (KO) [BR:apln00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     108744526  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:apln03019]     108744526    03041 Spliceosome [BR:apln03041]     108744526    03009 Ribosome biogenesis [BR:apln03009]     108744526    03016 Transfer RNA biogenesis [BR:apln03016]     108744526 Enzymes [BR:apln01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      108744526 Messenger RNA biogenesis [BR:apln03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     TRAMP complex      108744526 Spliceosome [BR:apln03041]  Complex B   U4/U6.U5 tri-snRNP components    U4/U6.U5 tri-snRNP related factors     108744526  Complex C    U4/U6.U5 tri-SnRNP related factors     108744526 Ribosome biogenesis [BR:apln03009]  Eukaryotic type   Pre-60S particles    Helicases     108744526 Transfer RNA biogenesis [BR:apln03016]  Eukaryotic type   tRNA degradation factors    TRAMP complex     108744526 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT MTR4_beta-barrel DEAD DEXQc_Suv3 ResIII ATPase_2 Motif Other DBs NCBI-GeneID:  108744526 NCBI-ProteinID:  XP_018335844 UniProt:  A0A1W4XIP1 LinkDB All DBs Position Unknown AA seq 833 aa AA seqDB search MADSFDDLFDCFSESLEAQKETAADLKNETNDLRNQLKRESEGTSQQSQKRTKIDTDVDF DDINFEELRNRIVVHEIESPESCTHEVACPPGYNFVPLQSRSTEPAKIYPFALDPFQKES ILCIDNNQSVLVSAHTSAGKTVVAEYAVAVSLKNKQRVIYTTPIKALSNQKYREFYDEFK DVGLVTGDVTINPTASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWE ETLILLPHNVHFVFLSATIPNARQFAEWVSHLHQQPCHVVYTDYRPTPLQHFIFPAGGQG IHMVVDENGTFKDENFNTAMAVLQNAGDASKGDQRGRRGGVAGKNPSETNIFKIVKMIME RNFAPVIVFSFSKKDCELYAMQMTKLDFNTTAEKQLVDEVFQNAMDVLNDEDRHLPQVEN LLPLLRRGKILRKSLWPFSIVIQIKIQDAEYDWGVIVNFKKITDNPPGRKGKTNTLVTKL QVDLLLHVISEGKGDTDGDDTDNLIPKPCSEDQSGEVEVVAVCSSLITHISSVRLYCPND LRSRDSRKGMFKAVKEVKKRFPDGLPLLNPITDMKIDESEFLDVVKKIENLEKKMFDHPM YKHPLLATEYPKYEKKIVVQEELTVARQKLMDAKSVLQLDELKCRKRVLRRLGYCTNTDV IELKGRVACELSSSDELLLTEMIFNGVFGQLTSGQCCALLSCFVCDEKSNDAPKLTEELS GPLRQMQELARRIAKISNEARLTLDEESYVEKFKPYLMDVVYAWCNGASFSVLCKMTDIF EGSIIRCMRRLEELLREMVQASKTIGSSALEEKFISAIKLIKRDIIFASSLYL NT seq 2502 nt NT seq  +upstreamnt  +downstreamnt atggctgatagttttgatgatttattcgattgctttagtgaatcattagaggcccagaaa gaaacagcagcagatttgaaaaatgaaacaaacgatcttagaaatcaacttaaacgtgag tctgaaggcacttctcagcagtctcaaaagagaactaaaattgatactgatgttgacttt gatgacattaattttgaagaattgagaaatcggatagtagttcacgaaatagaatctcct gaatcatgtacgcatgaggttgcctgccctccaggttataactttgttccattacagtct cggagtacagaaccagcaaaaatttatccttttgcacttgatcctttccaaaaggagtca atattatgcattgataataatcagtctgttctggtctcagctcatacatcagcaggcaaa acagttgttgcagagtatgcagtagcagtatctttaaaaaacaaacaaagagttatttat acaactcctattaaggctttatcaaatcaaaagtatagagaattttatgatgaatttaag gatgtggggcttgtaacaggtgatgttacaattaatccaactgcttcatgtcttattatg actactgagattttgcgtaatatgttatacagaggctcagaaataatgagagaagttggt tgggtaatatttgatgagattcattatatgagagataaagaacgaggtgttgtttgggaa gaaacattaatactgttgccacataatgtccattttgtatttctttctgctacaattcca aatgcgagacagtttgctgaatgggtttctcatcttcatcaacagccttgccatgttgtt tatacagattataggcctacacctttacagcatttcatttttcctgcaggaggacaaggc attcatatggttgttgatgaaaatgggacatttaaagatgaaaattttaatactgcaatg gcagtactacaaaatgctggtgatgcatccaagggtgatcaaagagggcgcagaggagga gtagctgggaaaaatccttcagaaactaatatttttaaaattgtgaaaatgattatggaa aggaactttgcccctgtaattgtttttagtttcagcaagaaagactgtgaattatatgct atgcaaatgactaaattagattttaacaccactgctgaaaagcaattggtagatgaagtt tttcaaaatgcgatggatgttttaaatgatgaggacagacatcttccacaagtggaaaat ctacttccattattaagaagaggtaagattttaagaaagtcattatggcctttttctatt gttattcagattaaaattcaagacgcggaatatgactggggtgtgattgttaacttcaaa aagatcaccgacaatccccccggtcgaaagggcaaaacaaacacgttggttaccaagctg caagttgacctgttgctgcatgtcatatctgaaggcaaaggcgacactgacggcgacgat acggacaatttgatacctaaaccatgttctgaggaccagagcggtgaagtagaggttgtt gcagtatgttcaagtttaataactcacatatcatcagttagactgtattgcccaaatgat ttacgatcaagagacagccggaagggaatgtttaaagctgttaaagaagtgaaaaaacgg tttcccgatggtttaccattactaaatcctatcaccgatatgaaaattgatgaatctgaa tttttggatgtcgttaaaaaaattgaaaatcttgagaaaaagatgttcgatcatcctatg tacaaacaccctctacttgccactgaataccccaagtacgaaaaaaaaattgttgtacaa gaagaacttactgtagctagacaaaaattgatggatgccaagtccgttttacaactggat gagctaaaatgtcgaaaaagagtactgagacgacttggttattgtaccaatacggacgta attgaattgaaagggagggttgcctgtgaattaagcagctcagacgagttacttttaact gaaatgatttttaatggtgtttttggtcaactaacgtctggccagtgttgtgctcttttg agttgttttgtttgcgatgaaaaaagcaatgatgcccctaaattaactgaagagttatct ggacctcttcgacaaatgcaggaattagcaaggagaatagcaaaaattagcaatgaagct cgtcttactttagatgaggaatcatatgtggaaaaattcaagccctatttaatggatgta gtatatgcttggtgcaatggagcttctttcagcgttttatgtaaaatgactgatattttt gaaggttctattataagatgtatgcgaagacttgaagagttattaagagaaatggttcag gcgtcgaaaacaataggaagttcagcattagaagaaaaatttatttccgcaattaaattg atcaaacgcgatattattttcgcatctagtctttacctataa

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