Agrilus planipennis (emerald ash borer): 108744682
Help
Entry
108744682 CDS
T07419
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03013
Nucleocytoplasmic transport
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108744682
03015 mRNA surveillance pathway
108744682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108744682
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108744682
mRNA cycle factors
P-body specific factors
108744682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
DNA_Packaging_2
Motif
Other DBs
NCBI-GeneID:
108744682
NCBI-ProteinID:
XP_018336068
UniProt:
A0A1W4XUB7
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MLGDDTKEDVDQGVQNDQQDDDENKDKEKEEKNIIESYIKETEERLQKRNELRNLNLNAQ
NTRPTESYFSKLDSNLKKNTTFVKKIKNFSASQVDTYIKDMNGLNLTKYISEIATAIVDA
KLKMTDVPAAIKLCSTLHQIYAEFSQHLFENWQKTLSFKSGEKIANPSKLRVDLRFYAEL
VSAGLFNNKNAFSLLGNVLTFLINMDKEEHLNLNIILSFCKHCGEDYAGLIPRKIRELSE
KYNLTTPRSTFLSPEKQQNVKVLLKDYYGSLSKHLIKDHNEVRQFEKQNKRILHTKGELS
QERKDKLDSLLVSFEKLSNSTQSLAEVLDEELPILQVDNHQNEDEHMVITGTGIDADEIA
SKVATIENIWGDIETQRFYCELPELQAFLPTSYLQKDKDKEKSDTPPPTGDTVTEEALDS
EIPAEELEDDGKSEEPLIEEEVEDNSSITVNNKIVLDAFLNNLPNCVNREMIDNAAIDFL
VTLNNKHNRRKLVRALFGVNRTRLDLLPFYARFVAILYPALPEVGNELCQMLRQDFKYQV
RKKDQINIESKIKVVRFIGELVKFKLYSKLDALYCLKVLLYDFSHHHIEMACNLLEVCGR
YLYCNPDSYQRTKVYLEQMMRKKAVMALDSRYVTQIENAYYYVNPPDVTPVAKKERPVMH
QFIRKLLYQDLQKNNIDKILRLMRKLDWNNEDVSAYAVKCLTGAHNMKYYNIRCLANLLS
GLVAYQEEIGTRVVDGVLEDIRLGMEVNLPKFNQRRVAQVKYLGELYNYRMVESADIFKV
LYSLITFGVTMDPNNPSPLDPTDHLFRIRLACVLLETCGTYFSSGNSKKRLDYYLVFLQA
YYWFKKSMLEIMPPFLEHMFKETLQTLRPKLKLFQSYEEAQVEVNNIRTTLGIENLTSTM
KDENHPEGVLENITETDNEDIGDDEISEGLAGPVTDETATEDETVDHTQGSDEEGSQYVS
EFEQETPSENLAIPSGPKKVECPEDEEFLNALDKMVSENIQERLREPVKATNMDISVPMM
LKSNKKTFDPLQESNENEQKTMGFVLMLRKGNKQQYKTFEADINSELAQNLRDQEVAQRE
EKERVKQLTLNITERFEEEDYQEMLQQQNKPSMQNLNRERKKYQHPKGAPDADLIFGKKL
R
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgttaggagatgatacaaaagaagatgttgatcagggggtgcagaatgatcaacaagat
gatgacgagaataaggataaagaaaaggaggaaaaaaacattattgaatcttatataaaa
gaaaccgaagaaagattacaaaaacgaaacgaacttagaaatttaaacctcaatgcccaa
aatacaagacctactgaatcgtatttttcaaaattagattcaaatttaaagaaaaacaca
acgtttgtgaaaaaaattaaaaattttagtgcctcccaagttgacacctatattaaagac
atgaacggattaaatcttacaaaatacatatctgagatagcaacagctattgtagatgca
aaattaaaaatgactgatgtccctgctgcaattaaattatgcagcacacttcatcaaata
tatgcagaattttctcaacatttatttgaaaattggcaaaaaacactgtctttcaaatct
ggggagaaaattgccaacccaagcaaattaagagttgacttgagattttatgcagaatta
gtaagtgctggattatttaacaacaaaaacgcatttagtttattgggaaatgtacttact
tttctgataaatatggacaaagaggaacatctaaacttaaatattattttaagtttctgt
aaacactgtggtgaagactatgcaggtttaatcccccgcaaaataagagaactttctgaa
aaatataatttaactacaccaaggagcacattcctatctccagaaaaacagcagaatgtt
aaagtacttttaaaagattactatggatctttaagtaagcatttaattaaggaccacaat
gaagtgaggcaatttgagaaacaaaacaaaaggattttacatacaaagggtgaacttagt
caagaaagaaaagataagctggactccctcttagtatcttttgaaaaattatcaaattca
acacaaagtttagctgaagtgttagatgaggaattaccaatacttcaagtagacaatcat
caaaatgaagatgaacatatggtcataacgggcacaggaattgacgccgatgaaatagct
tccaaagtagcgactatagaaaatatctggggagatatagagacacaacgtttctattgt
gaattacctgagctacaagcttttctacccacttcatatttacaaaaggacaaagacaaa
gaaaaatctgacactccaccaccaactggcgatactgtaacagaagaagcgctcgattct
gaaatacccgctgaagaattagaagatgatgggaagtctgaagaaccattaatcgaagaa
gaagtagaagataatagttcaataactgttaacaataaaatcgtattagatgcattttta
aataacttgccgaattgcgttaatcgtgaaatgatcgacaatgccgcaatcgatttcctt
gttactttaaacaataaacacaacagaagaaagttggttcgcgccctttttggtgtcaac
aggactcgtctggatttgctaccattttacgcacgattcgttgcaatcctctatcctgcc
cttcctgaagtaggaaatgaactttgtcaaatgctaagacaagattttaagtatcaagta
cgaaaaaaagatcagatcaatatcgaatcgaaaattaaagtggtgagattcataggcgaa
ttggtgaaatttaaactgtattccaaacttgatgcgctttattgcttaaaagttcttctt
tacgacttctctcatcaccacatcgaaatggcatgcaatttattagaagtgtgtggtcgt
tatctctattgtaatcccgattcttatcaaagaacgaaggtttacctcgaacaaatgatg
aggaagaaggcagtgatggcccttgattcgcgctacgttacacaaatcgaaaatgcctat
tattacgtgaatccacccgacgtgacacctgttgctaaaaaagaaagaccggtcatgcat
cagttcattcgaaaacttctctaccaagacttgcagaagaacaacatagacaagatacta
agactgatgcgaaagcttgactggaataacgaagacgtgtcggcttatgcagtcaaatgt
ctgacaggagcacataatatgaagtattacaacataagatgcttagcaaaccttttatcc
ggcttagttgcttatcaagaagaaataggtacacgggtagtagatggggtattagaagac
ataagactgggcatggaagttaatctacccaaatttaatcaaagaagagttgcacaagtt
aaatatctaggcgaattatacaattatcgtatggtagaaagtgcagacatatttaaggtc
ctatattctttaataacattcggtgttacaatggatccgaataacccttcgcccctagac
cccaccgatcatttatttaggatacgtctagcttgtgttctactggaaacatgtgggacg
tatttcagtagtggaaatagtaaaaagcgcctagattattatttagtatttcttcaagca
tattattggttcaagaaatctatgttagaaattatgcccccttttttggagcacatgttc
aaggagacactacaaactctaagaccaaagctcaaattattccaaagctatgaagaagct
caagtagaagttaataacatcagaactacattaggaattgaaaacttgacatcaactatg
aaagacgaaaatcatcccgaaggcgttttagaaaacattacagaaacggacaacgaagat
atcggagacgatgaaatttcggagggcttagctggtccagttactgacgaaaccgctaca
gaagacgaaacggttgaccatactcaaggatcagatgaagaaggtagtcaatatgtaagc
gagtttgaacaggagactccttcagagaacttggccataccgagcgggccgaaaaaggtc
gagtgccccgaagacgaagaatttttaaatgctctggataaaatggtatctgaaaatata
caggaacgtcttcgcgagccagtcaaagccaccaatatggacatttcagttcccatgatg
ctcaagtccaataagaaaacatttgatccgttacaggagtcaaatgaaaacgagcaaaaa
acaatgggatttgttcttatgttacgcaaaggcaataagcagcagtataagacttttgaa
gcggatattaattccgaacttgcccaaaatttacgtgaccaagaagtagcgcagcgtgaa
gaaaaagaacgagttaaacagttaacccttaacataaccgagagatttgaagaagaggat
tatcaagaaatgttgcagcaacaaaataaaccgtccatgcaaaatttgaacagagaacga
aagaaataccagcatcccaaaggagctccagatgccgacttgatattcggaaagaagcta
cgctga
DBGET
integrated database retrieval system
