Agrilus planipennis (emerald ash borer): 108744854
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Entry
108744854 CDS
T07419
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apln04131
]
108744854
Membrane trafficking [BR:
apln04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
108744854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_N
HPS3_C
YiiD_C
Motif
Other DBs
NCBI-GeneID:
108744854
NCBI-ProteinID:
XP_018336316
UniProt:
A0A1W4XJM3
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MVHVISVHNFASQHIQTVEQPTASSVAPPHRLLLALSSHCVEVRDLKSDGDLLFTFPTVD
HVRQIQHCINGNFIVTLESKTSRQYKESNSVRVYVNWDSVAALQQSKMTSSGVSLGSSEC
GMVQPMRARIAGRVTPTTNQSELGSLEMIEIPLRQNPTLVDCCQVSGNILILSANTLTVQ
LFHIKTHDISKLKFIDFEECPIQIELNFIPNEIAICENYIAYISRQSVHMFKIVSNDSTD
NEDQNDALACGFGLNCLDSSVTVDYKKLLEKESSTKSRDRITINLPSILKSNSLIHKNNP
FTYTDRDMGVNILSTSPMIDKRIPNCHAVNLVQLKLRPLLIENAQNQIVEEFKCIVLKPL
YVENVDKTSDKTHQSYFRSNYRQHLKGVAFMVTTQQEGYLYHFNDDDSSLDKDNCICVYP
FTAPVYSIVMEDYLLHALTETGLESYTLRTGHQLCRSLEVVDNINVACPSVDDCICMVGL
RPFLGIEKMLLSENFLVLLANADNSPTHSVGSNSSGSTISAWTLYTLELPSAKTIFDDIS
IVANSHQFASPQTYCHVMSEAHMILRNSLLLIRWNFSSSKSVCLAEPSKKLWEELGETYR
TSCALLGDHYILSPKYVLCIPYYKMAGLKPFEVLKRVKKLQEQSNIQITKGLIHYFKTTL
LNLKSSSDVDYLIKSGIKHNIIDEILDLFEKHSFDDIPHLVLKSGALREYSTSKFINILT
SRDKGKIQGSKEKSLALALLYIQQCNIQEADVVLSDMNREELYTILEENWELLFDMGNNG
NRNKGKISLSELATLMMSSNPEVLADVLVSLILDRRNVTLNRILKLFLEYLPSRTGEEAQ
CAGKVLQMVLEQYLKAYFASYETKELPKIVYDRSTQEAITILVRSYLSQLQILHLRTTKN
QETASMQGDPNENDETEEIATEKDSFKYNNVNITHFEDRPRPKPPENYLFSQLRHEYLDK
MSPFLTKTEDEEVNEEAKKVLKKLQAILCSQIVPKNVINEISVFLDLNKNLIGHESLKII
TMPVNEAVVRLINGCPECLLQYGKDHFNKTDEWKLLIATIQRKIIQLSLDEEFTKECDFY
KQLLKEVLTYVATTMNLEQLFQVFPQPVTTQHFGEKGQNEDVTTVTEETIGSDDLASNIG
PMLNEIQNYGTYITICKETMHANQIKKLISTTGQQLLCTLNL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtaatttcggttcacaattttgcaagtcagcacatccaaacagtggaacaa
cccactgctagttcggtagcaccccctcatcgtctattattggctttatcaagccactgt
gttgaagtgcgagacttaaaaagtgacggtgacttattgtttacatttcctacagttgat
catgttagacaaattcaacattgtatcaacggtaattttattgttactttggagtcaaaa
acttcacgtcagtataaagagtctaacagtgtgagagtgtatgtcaactgggacagtgta
gctgctctacaacaatctaaaatgaccagtagtggagtcagcttgggttcttctgaatgt
ggtatggtacaacccatgagagcccgcattgctggtcgtgtgactccaaccaccaaccaa
tcagaactaggtagtttagaaatgattgagattcctcttcgtcaaaaccccaccttggtg
gattgctgccaggtgtctggtaacattctaattttatcagccaatactctaactgttcaa
ctatttcatatcaaaactcatgacatttctaaactaaagtttattgattttgaagaatgt
cccatacaaattgaattaaattttataccaaatgaaattgcaatttgcgaaaattacatc
gcttacattagcagacaaagcgtacatatgttcaaaatcgtctcgaatgatagcacagat
aacgaagaccaaaacgacgcccttgcttgtggatttggcttaaattgtcttgatagctca
gtaacagtggattacaaaaaacttttggaaaaagaatcttcaactaaaagtagagatcga
attacgattaatttaccaagtattttgaaaagtaacagtctaatacacaaaaacaacccc
ttcacatatacagacagggacatgggagtgaatattctatcaacttcaccaatgattgat
aagagaattccaaattgtcatgcagtgaatctagttcagctaaaacttaggcctttgctg
attgaaaacgcgcaaaatcaaattgtagaagagtttaaatgtatcgttttgaagcccctt
tacgtcgagaatgtggataaaacgtcagataaaacgcaccaaagttattttcgaagtaat
tacaggcaacatttgaaaggggtagcgttcatggtaacaacccaacaggagggttattta
tatcatttcaacgatgatgattcatcattggataaagacaactgtatttgcgtttatccg
tttactgcccccgtatatagtatcgtaatggaagattatcttttgcacgccttgaccgaa
acggggttggaatcgtacaccctcagaactggccaccagctttgcagaagcctggaagtc
gtggataatataaatgtggcgtgtccctctgtagacgactgtatttgcatggtaggcctt
aggccatttctgggaatagaaaaaatgttgctttccgaaaatttcctagttcttctggcg
aatgctgataattctcccactcattctgtgggctcgaacagcagcggttctacaatttct
gcttggactttgtatactctcgaattaccatctgcaaagaccatttttgacgacatctcc
atcgttgcaaattcccaccagtttgcctctcctcaaacctattgtcatgttatgagcgaa
gcccatatgatcttgaggaacagtctgttgttaattaggtggaatttctcatcttctaaa
tcagtatgccttgctgaaccttctaaaaagctttgggaggagctgggagagacctatagg
acttcatgtgctcttctgggagaccactatatcttgagccctaagtacgtgttgtgcatt
ccatattataaaatggctggactaaagccctttgaagtccttaaacgcgtgaaaaagctc
caggaacaatccaacattcagattacaaaagggctaatccactatttcaaaactacactg
ttgaatttgaaaagtagttctgacgtagattatttaattaagtcgggcataaagcacaac
attatagatgaaattctggatttatttgaaaagcatagtttcgatgacattccccattta
gtcctgaaaagcggtgctctcagggaatactctacgtctaaattcatcaacatacttacc
agcagagacaaagggaaaattcagggttctaaagagaagtcgttagctcttgcattactt
tacatccaacagtgtaacattcaagaagcggatgttgtcctgagcgacatgaatagggaa
gagctttacactattttggaagaaaattgggaattattatttgacatggggaacaacggg
aacagaaacaaaggaaaaatttccctgtctgaactagccacccttatgatgtcctcgaat
ccagaagtattagcagatgttttagtttctttgattctggataggaggaacgtcactttg
aacagaatcttgaagttatttctcgaatatcttccttcacgaactggggaagaagcccag
tgtgccggtaaagtactccagatggtcttggagcagtacctgaaggcctactttgcaagc
tacgagaccaaagaattaccaaaaattgtatatgaccgttcgacccaagaagccatcaca
atcctagtaaggtcgtacctgtcgcaactccaaattcttcatctcagaaccaccaaaaat
caggaaactgcgagtatgcagggggaccccaatgaaaatgacgaaacggaagaaatagcg
actgaaaaagattccttcaagtacaacaacgtcaatataactcattttgaagacaggcca
agaccaaaaccaccagaaaattatttattttcccaattaagacacgaatatttggacaag
atgtcaccttttttgacgaaaaccgaagatgaggaagtcaacgaagaagctaaaaaagta
ttgaagaagttacaggcaattttatgcagtcagatcgtaccgaagaacgttattaacgaa
atcagtgtttttttagacctcaacaagaatctcataggtcacgaaagtcttaagatcata
acgatgccagtgaacgaagctgttgtcagactcattaacggatgtccagagtgtttactc
caatacggaaaagatcattttaataaaactgacgaatggaaactcctgattgccaccata
caaaggaagatcattcaactgagtttagacgaagaatttactaaagaatgcgatttttat
aagcaactattaaaagaagtcttaacttatgtggcaacgaccatgaacttagaacagctc
tttcaggtgtttcctcagccagtaacgactcagcactttggagaaaaaggacaaaatgaa
gatgtgacaacagtcactgaagagaccataggttctgacgatttagcaagtaatattggt
ccaatgctgaacgaaattcaaaattatggaacctatataaccatctgcaaagaaactatg
cacgctaatcaaattaaaaagcttatctctaccactgggcagcagcttttgtgtactctt
aatttgtaa
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