Agrilus planipennis (emerald ash borer): 108745140
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Entry
108745140 CDS
T07419
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03008
Ribosome biogenesis in eukaryotes
apln03013
Nucleocytoplasmic transport
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108745140
03015 mRNA surveillance pathway
108745140
03008 Ribosome biogenesis in eukaryotes
108745140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108745140
03009 Ribosome biogenesis [BR:
apln03009
]
108745140
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108745140
mRNA cycle factors
Stress granule specific factors
108745140
Ribosome biogenesis [BR:
apln03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108745140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
LRR_4
NTF2
LRR_8
Tap-RNA_bind
UBA_8
Motif
Other DBs
NCBI-GeneID:
108745140
NCBI-ProteinID:
XP_025831543
UniProt:
A0A7F5R6E4
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MDLQMSSSAVLINDARACASLLVRNSKLFINPQYWHKITIHNCEGIHRDVLLKAVLDAIH
PNDLIPVHFRKEDSNASFLARNCKAAIEKLCQNNLFIANPLNNNLPFKLSIVLAYSTTND
LQINVQDNVLEVLNKRYNSTTKTLNLDAFYKDPDLEEFCVLSQPKILYFVLHLSKNLIVQ
HLKLSNNDISILNPVESLWGVKNLTSLDLRNNSIESIKKLTILSSLSIHDLWLDGNPLCD
EYDEYTYVQAVKEVCPQIEKLDGIILRQSGFPAFRRNYLCNPKCQEMIDNFMEHYFTIYD
NKNERNKLLGIYEQNATFSITSRYLIGQSTSATASLTPYKLVSRNIRTLSDLAKSDENLV
MGNEKIIKIIQNLPPTEHDPYTFTVDLMKCTDELILLVVNGVFRECSDNLSAPERILGFT
RTFILGANDNNEYRIINEQLHVSNATTIQQQRAFKVVKVAKDNIFTSSFTEAEKKEMIEA
VKTFTTMNMEWSKKCLEECHYNLPKALSLFVDLYKVDNIPEEAFQR
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggatttacagatgtctagcagtgccgttttaataaatgatgccagagcatgtgcttct
cttttagtaagaaatagtaaactcttcatcaatccacaatattggcataaaattactatt
cataattgtgaaggtattcatagggatgtattactaaaagcagttttggatgctatacat
cctaatgatttgatcccagtgcattttagaaaagaagattccaatgcttcatttcttgca
aggaattgcaaagcagcaattgaaaaattgtgtcagaacaatttatttattgctaaccct
ttgaataacaatttaccttttaaattatcaatagtattggcatattcaacaactaatgat
ttgcaaattaatgtacaagataatgtgcttgaagttcttaataaaagatataattccact
acaaaaacactaaatctagatgctttctacaaagacccagatttagaagagttttgtgta
ctctctcaaccaaaaatattatattttgttttacatttaagtaaaaatttaattgtccaa
catcttaaattgagcaataacgacataagtattctcaaccctgttgaatctctttgggga
gtaaagaatttgacttccctagatttgaggaacaattcaattgaatcaattaagaagcta
accatattgagttctttatcaattcatgatctttggcttgatggcaatccattatgtgat
gagtatgacgagtacacatatgttcaggcagttaaagaagtatgccctcagatagaaaaa
ctcgatggaataatacttcgacagagtggttttcctgccttccgccgtaattatctatgc
aatccaaaatgccaggaaatgattgataatttcatggaacattattttacaatttacgat
aataaaaatgaacgcaataagctattaggaatttacgaacaaaacgcgacattttctatt
acaagtagatatcttataggtcaaagtacatctgcaactgctagtttaacaccatacaaa
ctcgtgtcaagaaatattcgtactctatcagatttagcgaaaagcgatgaaaatcttgta
atgggcaatgagaaaatcattaaaataattcagaatcttccaccaactgagcatgatccc
tatacatttactgttgacctcatgaagtgcacagatgaacttattttattggtggtgaac
ggcgtatttcgtgaatgctctgacaatctttcagcaccagagagaattttgggttttaca
cgtacatttattcttggtgcaaatgataacaatgaatacagaattattaacgaacagttg
catgtcagtaatgcaactacaattcagcaacagcgagcgtttaaagtagttaaggtggca
aaagataacatttttacatcttcatttaccgaggcagaaaaaaaggaaatgattgaggca
gtcaaaaccttcactacaatgaatatggaatggtcgaaaaaatgtcttgaagagtgtcac
tataatctcccaaaagcgttatcattgttcgtggatttgtacaaagtggataatattcct
gaagaagcatttcagagataa
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