Agrilus planipennis (emerald ash borer): 112904549
Help
Entry
112904549 CDS
T07419
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apln04131
]
112904549
Membrane trafficking [BR:
apln04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112904549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
Motif
Other DBs
NCBI-GeneID:
112904549
NCBI-ProteinID:
XP_025830550
UniProt:
A0A7F5QZ32
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MLEGVVARLFNQLLGRYVVDLDTENLNVGIFSGQVQMTDVRLKPEALYELELPIEVVMGT
IGKIWLQIPWNRLWSQPVVVNIENIHILAKPIVRFEKYDSEKDKRLLRAFKRRALGKLDS
EGFNIGGPQSFAEHLVANIVNNMQITLTNIHIRYEDTVSVEYPIACGFCIGSISAEPTNS
KWKACKVNESSTTCYYLVKVEALYTYWNVNITPPDWNFPSDYYTWRNIWDINLNLKVPIF
IIPEDGNIAGNSSLLILDLGRIEVTTELWKRNVVLEFATQMEMEEQLYSRLHIKCSDIQV
LFGNSKDNWKESMKEKDTELHILPKTKISAFYALRVRDVSNIPRYKFSSAFENFKINIRE
KRLEQIFDYFDSLLESKRNEIPQNRASRWLNDTIFTRNSYSYHCHVLSIIKKSTGLSKPK
SKDNSSSTSSTNQDKKRNVEMPKQDMNEAFARVIDLPGLEDNISPNNTIRTLLRFSFNEF
TLTVFRSNAATDKQYLILRLHEVTVDLAYMTYGPAYQVSVRSICLTDKCHTTCSGQYLDL
IHSPFPSKEDIFVLLYRRVDAKCPDFWTHFHGVETSLVADFDTVHLTLHQEATENLLKYT
KYLCYTICSKLSGLLIPSVKNTWAKIKASFSDSRKNTPVPPGAVKYSQSGRLNIMDIKVC
ASDFDIMGIQISGLEVDLLFRANERFVFKSFLRHISVDHLSEVTLYPKILTTDGEKVYEV
KYVQNATHIVEQNQGNEDKIVTNGTFKFYLGRLHITFLYKLIVQFQRFLLGMEMISCVES
LYEIFSRNISKITETLKPNSKIHLAINLQGPVILFPQKSDSPNVIIVDTGELHLENFFKR
YSNDVVDNILVKLDQICLSRAVMGLTANIEMQETMLEPLGLNLDVKSYVSQSNSLKTNIS
WEVDGNLDVIQINVGQRDLSTLIACYTDNIGEGKLLNLLPEKKKVPIKEDESLEAVKKLE
SFFCKPKQKDISLKFSLDGLHVTLFFDPSELLSSPIRDLNHGFCKIELAEIALYVVVYTD
KTLEGKFNAEMITIEELGPDVNTCNKYILQSTAEDSANNNAKVTINKPPVIDITFTQNKS
NDKSVDTIIGSLSLSLSVPFCEKIAIFILESLPKENTDLGIVNHGYISDHSEQEPTVNCT
SSLTVALRINKPEFIFVIESTSKKQKYFITRSEVLLDYSRHNNTLNLVLSLSGIHTLFYD
SGLSYSDSYVVLKRCEIELARNYSEDKGEKISLSVSPIQIHICDRVVHSITDILHDIAEH
FRVPDQTSRKSSRAGKRFSQKSFEHDDLWESKKLPETQDELKNIYVNPKPPVHKIHQVFL
MSKTDFLVVLHLEETPVFMLKSSIEMTICGWSHMLNSTCQVTLQANYFNENAQEWEPFVD
PVVVNECEYKPWEIMIKVFQDRAMPIITCPEIRMQKDTNKNQKRNLESFSGDEDSDEEMV
YMEPPTTLRNNQKRRITTSLSSLLQESDSETEEGSNDKLMSAISDLFTGDWNESEASSVE
QSSSDEDENFDEDSTSHSKSNKVETDADFFEKATYVILDGKETLNITITPSLLKVIKDLN
ISYFGKTLSMIHNKSSINIVNEIGPNTKIELLRRNSKDNSEEYVLLDSKTYESQDSYPSS
PTRENCDISTKESDELAKMDADLCCSFEIAECFDFPPQTTATLYESAQRHFLKVYVPGFL
PMQTNCPKRAWEKLISLQSVSNPEMYYLVAKHTVGKIKTITVSSPLEIRNETCFAMSVFY
EPAILQKLNLEPIGYMKNPFEPTMRMAVLEPHEQFHVPLFIAFHCKLFIQPAYAE
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaggggttgttgcgaggttatttaaccagttgttggggagatatgtggtggat
ttggatacggaaaatttgaatgttggaattttttctggacaagtgcagatgactgatgta
cggctcaagccagaagctttgtacgagttggaactacccatagaagtagtaatgggtact
attggaaaaatatggttgcaaataccatggaaccgtttatggtcgcaaccggttgtcgtg
aatatagaaaacattcatattctggctaaaccaatagtcaggtttgagaagtacgattcg
gaaaaagacaagaggcttttgagggcgtttaaaaggagagcgttaggaaaactcgacagc
gaaggatttaatataggaggaccgcagtccttcgcggaacatttagttgcaaacattgta
aacaatatgcaaattacattaaccaatatacatattagatatgaggatacggttagcgtc
gaatatccaatcgcttgcggattttgtattggcagcatttctgcagaacctaccaatagt
aagtggaaagcttgtaaagtaaatgaatcttctacaacgtgctactatctggtaaaagta
gaagcgttatatacatattggaacgttaatattacgcctcctgattggaattttccttct
gattattacacgtggaggaacatttgggatataaatttgaacttaaaggtgcctatcttt
atcatcccagaggatggcaacattgcagggaacagtagtcttttgatattagatttaggg
agaatagaagtcaccaccgaattatggaaaagaaatgtcgtccttgaatttgccactcaa
atggaaatggaggagcaactatattcccgcttacacattaagtgttccgacattcaagtc
cttttcggaaattcaaaagacaactggaaggaatcaatgaaagagaaggacactgaattg
catattttgccaaagacaaaaatttcagctttttacgcgttacgcgtccgagacgtttcg
aacataccaaggtacaaatttagctctgcttttgaaaactttaaaataaatatcagagaa
aaaaggctagagcagattttcgactactttgattcattactagagagtaagaggaacgaa
attcctcagaatagagcatcgaggtggttgaatgacactattttcactagaaattcttat
tcttatcattgccatgtattatctattatcaaaaagtcaaccggattgagcaaaccgaaa
tctaaagacaattcctcctcgacgtcttcaactaaccaagataagaaaagaaatgtggaa
atgccaaagcaggatatgaatgaagcatttgcaagagtaatagatttgccaggacttgaa
gacaatatttcccccaacaatacaattcgaactcttctcaggtttagctttaacgagttt
acgttgacagtattccgatcaaatgcagcaacagacaagcagtaccttattcttcgactt
catgaagtcactgttgacttggcctacatgacttatggtccagcttatcaggtttcggtg
agaagtatttgtttaacagacaaatgccacactacttgtagtggtcagtatttagatctc
attcatagtccttttccgagtaaagaagacatttttgttctactttatagaagggtagat
gcaaaatgcccagacttctggacacattttcatggggtggaaacatccctcgttgcggat
tttgacactgtccatttaactcttcatcaggaagcgactgaaaatcttttaaaatataca
aaatatctgtgttataccatttgcagtaaactttctggattattaatcccttcggtcaaa
aatacttgggcgaagataaaagcgtcgttttcggactctcgtaagaatactcctgttcct
cctggagctgttaaatactcacaatcaggtcgactcaatataatggacataaaagtatgc
gcctccgattttgacattatgggcattcagatatctggactggaagttgatttgctcttt
cgggcaaacgaacgatttgtgtttaagtctttcctgagacatatttctgtagaccatttg
tctgaagtaacactttatccaaaaattttgacaactgatggtgaaaaggtgtatgaagta
aagtatgtccaaaatgcaacccacatagtggagcaaaatcaagggaatgaggacaaaatt
gtcaccaatggaaccttcaagttttatttgggacgactacatataacattcctttataaa
ctaattgtgcagttccagcgctttcttctgggaatggaaatgatttcttgcgtggagagt
ctatatgaaattttctcaaggaacatttccaaaataacagaaaccttaaaaccaaattcc
aaaatacatcttgctataaatctacaaggtccggttattttatttcctcaaaaatccgat
tctcctaatgtaattatcgttgacacaggcgaattacatttagaaaatttcttcaagagg
tactcaaacgatgttgttgataatattcttgttaaacttgatcagatatgcttatcaaga
gctgtaatgggtttaacggcaaacatagaaatgcaggaaacaatgttggagccgcttgga
ttaaatttggatgtaaaaagctacgtatctcaatccaattctcttaaaacgaatatatcc
tgggaagtagatggaaacttggacgtaattcagataaacgtaggacagagagatttgtca
acactaatagcctgttacacagacaacataggtgaaggaaagcttttgaacttgctccct
gaaaagaagaaggtcccaattaaagaggatgaatccttagaagccgttaagaaattagag
tcctttttttgcaaaccgaaacagaaagacatttcgttgaaattttcattggatggctta
catgtaacgttatttttcgatcctagtgaattattaagctcgccaattagggatttaaat
catggattttgtaaaattgaattagccgaaattgctctgtatgttgtggtttacacggac
aaaactttggagggaaagtttaatgctgagatgattacaatagaagaattaggaccagac
gtaaacacatgtaataaatatatcttacagtcaactgcggaagacagtgcgaataacaat
gccaaagtaacaataaataaaccgcctgtcatagatataacatttactcaaaacaaatcc
aatgacaagtctgtagatacaataattggaagtttaagtttaagtctgtccgtgcctttc
tgtgaaaaaattgcaatattcatcttggaatcgttaccaaaagaaaatacagatttgggt
attgtaaaccatggttacataagtgatcattcagaacaagaaccaacggtcaactgtacc
tccagtttaactgtagctttacgaataaataaaccagaattcatttttgttattgaaagc
acttccaagaaacagaaatattttattacgagatcggaagttttactggattattctaga
cataataatactttaaatttggttttgtctctttctggaatacatactctattttacgac
tctggattaagctattctgattcttacgtagtcttgaagaggtgtgaaattgaattagcg
agaaattattccgaagataaaggagagaaaatttcattatcagtatcgcctatacaaatt
catatatgtgatagagttgtccattctattaccgacattcttcacgatatcgcggaacat
tttagagttcctgatcaaacatctcgaaagtcctcaagggctgggaaaaggttttcacaa
aaatcatttgaacatgacgatttatgggaatcaaagaaattacccgaaacccaggacgag
ctaaagaatatttatgtaaatcctaaaccacctgttcataaaatccatcaagtatttctg
atgtccaagactgactttctcgttgtgcttcatcttgaagaaactccagttttcatgtta
aaatcttcaattgaaatgacaatttgtggttggtcacacatgttaaattctacgtgccaa
gtaacattacaagcgaattatttcaatgagaatgctcaagaatgggaaccattcgtagat
ccggttgttgttaacgaatgtgagtataaaccatgggaaataatgataaaggtatttcaa
gatagagcaatgccaataataacttgtcctgaaattaggatgcaaaaagatacaaacaaa
aatcagaaaagaaatctggaatctttcagcggcgatgaagattcagacgaagagatggtc
tacatggaaccacctacaacgttaagaaataatcaaaaacgtagaataactaccagttta
tcttcattacttcaggaatctgactctgaaaccgaagaaggatctaatgacaaacttatg
tctgccatatcagatcttttcactggagattggaacgaaagcgaagcgagctcggtagaa
caatcatccagtgacgaagatgaaaattttgatgaggattcgacttctcattctaaaagt
aacaaagttgaaacagatgctgatttcttcgaaaaagcaacatacgtcatacttgatgga
aaggaaacgctgaacatcacaataacaccttccttattgaaggttattaaagatttaaat
atctcttattttggaaagactctctcaatgatacataacaagagcagtataaacatagtt
aatgaaattggccctaatacaaaaatagaattgcttcgaagaaacagcaaggacaatagc
gaagaatatgtgctacttgattccaagacgtatgagagtcaagattcatatcctagtagc
ccaacgagagaaaactgcgatatttcaactaaagaaagtgatgaacttgcaaaaatggat
gccgacctttgctgtagtttcgagattgccgaatgtttcgattttcctcctcaaacaact
gcaactttatatgaaagtgcacaacgtcattttttgaaagtctatgtacctggattttta
ccaatgcaaaccaattgtccaaaacgcgcatgggaaaaattaatcagtttgcaatccgtt
tctaatccagaaatgtattatttggttgctaagcataccgttgggaaaataaaaactatt
acagttagttcccctcttgaaatacgaaatgaaacatgttttgctatgagtgttttctac
gagccagccatcctccagaaattaaatttggagcccattggatacatgaaaaaccccttt
gaacctacaatgcgaatggcagtactagaaccccatgaacagttccatgttcctcttttt
atagcatttcattgcaaattatttattcaaccggcatatgcagagtaa
DBGET
integrated database retrieval system
