Agrilus planipennis (emerald ash borer): 112904998
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Entry
112904998 CDS
T07419
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112904998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apln03041
]
112904998
03009 Ribosome biogenesis [BR:
apln03009
]
112904998
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112904998
Spliceosome [BR:
apln03041
]
Complex A
U2 snRNP components
U2 related factors
112904998
Complex B
112904998
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112904998
Ribosome biogenesis [BR:
apln03009
]
Eukaryotic type
90S particles
Helicases
112904998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
112904998
NCBI-ProteinID:
XP_025832234
UniProt:
A0A7F5R8E8
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MGPNDHHLTTLCLFYFEGPEVGELKCIPLYSTLPPNLQQRIFEEPPPNKANGAIGRKVVV
STNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPG
KCFRLYTEKAYKNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA
LELLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQC
FVRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNMEDPQWCYDNFINYRSLKSADN
VRQQLSRIMDRFNLKRTSTDFSSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQMV
QLHPSTCLDHKPEWVIYNEFVLTTKNYIRTVTDIKAEWLLKIAPQYYDLQNFPQCEAKRQ
LEVIQNRLESRQYQQGF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgggccccaacgatcatcatcttactacactttgtctgttttattttgaaggacctgaa
gtgggtgaattaaagtgcatcccactatattcaaccctaccacctaacctacagcagcgc
atctttgaagaacctcctccaaacaaagcaaatggtgcaattggacgaaaagttgttgtt
tcaacaaatattgctgaaacatcccttacaattgatggagtggtattcgtaattgaccct
ggattcgctaaacagaaggtgtataaccctcgaatacgcgttgaatcattacttgtatct
ccaatcagcaaagcctctgcccaacagcgagctggaagagctggaaggacgagacctggt
aaatgctttaggttgtacactgaaaaggcctataaaaacgaaatgcaagataacacttat
cctgaaatattaaggtcaaacttgggttcagttgttcttcagttaaaaaagttgggtatc
gatgatttggttcactttgattttatggatccacctgctccagaaaccctaatgcgagca
ttggaactgcttaattatcttgctgcccttgacgatgacggaaatttaactgacttagga
gctgtaatggccgaatttccgctcgatccgcaattggccaagatgcttattgccagctgc
aaccataattgctctaatgaaattttgtcaataacagcaatgttgtcagtcccgcagtgt
tttgtccgaccgaacgaggcaaaaaaagcagccgacgatgccaagatgcgattcgcacac
atcgatggtgaccatcttacccttctcaatgtttatcatgcattcaaacagaatatggaa
gatccacaatggtgttacgataacttcatcaactatcgctcacttaagtcagcagataat
gtcaggcaacagttgtcgcgcataatggatagatttaatttgaagagaacatccactgac
ttcagcagcaaagattattacattaacataagaaaagctttagttaatggatttttcatg
caggtggctcatctagaaagaacaggccattacttgacgattaaagataatcaaatggtt
cagttgcatccttctacttgtctcgatcataagccagagtgggtcatttataacgaattt
gttttaacaacaaaaaattacattagaactgttactgatattaaagccgaatggctattg
aaaatagctccacagtattatgatctacaaaattttcctcagtgtgaggcaaaacgacaa
cttgaagttattcaaaatcgtttggaatctaggcagtaccaacaaggtttttaa
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