Agrilus planipennis (emerald ash borer): 112905913
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Entry
112905913 CDS
T07419
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln04140
Autophagy - animal
apln04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112905913
04148 Efferocytosis
112905913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apln04131
]
112905913
Membrane trafficking [BR:
apln04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
112905913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
B129_C2H2-zf
zf-C2H2
Zn-C2H2_12
Vpu
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
112905913
NCBI-ProteinID:
XP_025835075
UniProt:
A0A7F5RGT1
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MHEAYCISPLLNLPVQIESVVAFDDNLIVGTRQGYLYVYRVNCSNDDKYEVELTCYLKTF
SKKSIQQLEVIPEYNLLVSLTDNFIQVNDMKSSNLPVITQVAGTKGAMIFTLDSKKETSL
TGEVSHVIRMCVAVKRKLQLYYWKKDVFMKLADDIMLTDIPKALVWCSETICVGFKGEYL
LFDLDGTKKELFPTSSSRSNDPCAMKVSNTIFALGRDAQTVLVNVEGLPEKTKALRWSDI
PIQMAWDKPYVIGILPEGIEVQTIDPGGLVQKFSNLPKARLITFCKQGLLYVSSVSHIWC
LHAIEISQQRQQLLKEKQFQLALKLTEVSNESEEDKDEKKHQIQTLLAYDLFRNKAFHES
MQQFLKLRTDPYDVIRLFPELLPQQSGETTKLEYVGNLSDSELERGLLALIEYLTEKRYL
VHVESEAGMNASGKLNDQIVTNKTSQQLLQIIDTTLLKCYLQTNDVLVAPLLRLNHCHLA
EAERTLKKHGKHNELIILYQTKGQHRKALELLQNSEGGIERTIAYLQHLGVEQMGLILEF
SDWVLKEAAEDGLKIFTEDLAEVEALPRPRVLDYLLRSHPTLVIPYLEHVVHIWGDKNPL
FHNALIHQYREQSLSDNPSAEIAKKKLLYFLETSSNYTPDMVLMHFPNDRLLEERAIVLG
KLGRHEDALAIYVRALGDVQKAIKYCENVFNKNENAKKVYVCLIKLVLNPNDVILDLPGL
TLSPLTAQPDLEMALKLMEEHASKIDPLSALQIIPDNVLATRIFQFLSAALHKSLHVRRT
VQLLKGLLYAQHLQGQEARLRLQSQCVVITDLNICPVCKKRFSHQSALVRYANGNVVHYS
CHDKKI
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagcgtattgcatatcgccgctgttaaatttaccagttcaaatagaatcagtt
gttgctttcgatgataatttaatagttggaacaagacagggatatctttatgtatatcga
gttaattgttctaatgatgacaaatatgaagtagagctaacgtgttatctaaaaacattt
agtaaaaaatcaattcaacaactggaagtaataccagagtataatctgttggtcagttta
acagataactttatacaagtaaatgacatgaagtccagcaatttgccagtaattacccaa
gtcgcaggaactaaaggagccatgatctttacattagatagtaagaaagagacatcttta
actggtgaagtaagtcatgtaattcgaatgtgcgtagcggttaaaagaaaattacagttg
tattattggaagaaagatgtttttatgaagcttgccgatgatataatgttgactgatatt
ccaaaagcattggtatggtgtagtgaaacgatctgtgtaggatttaaaggagaatatcta
ctatttgatttggatggaacaaaaaaagaactttttccaaccagtagtagcagatctaac
gatccctgtgcaatgaaagtatcaaataccatatttgcacttggaagggatgcacaaaca
gtgcttgtaaatgtagagggacttcccgaaaaaactaaagctttaagatggtcagacatt
cccatacaaatggcctgggataaaccgtatgttataggaattttaccagaaggcatagag
gttcaaacaattgatcctggtggtttagttcaaaagtttagcaatttaccgaaggctcga
ttaataacgttttgtaaacaaggcttgctttatgtgtcttctgttagtcacatttggtgt
ttacatgcaatagaaattagtcaacaaaggcaacaacttctaaaagaaaaacaatttcaa
cttgctttaaaattaacggaagtttcaaatgaatcggaagaagataaggatgaaaagaag
caccaaattcaaaccctcttagcctatgatttatttcgaaataaggcatttcatgagagc
atgcagcaatttttgaaattacgcacagacccgtacgacgtaatacgtttattcccagaa
ttattaccgcaacaatctggagagacaactaaattagaatatgtaggaaacctttccgat
agtgagttggaaagaggactacttgcacttattgagtatctcacagaaaaacgttattta
gtgcacgtggaatcggaggcaggtatgaacgctagtggtaaattaaatgatcaaattgtt
acaaataaaacgagtcagcagttacttcagatcattgatacaacccttttaaaatgttat
ttgcaaaccaacgacgttttggttgcgccattattacgacttaatcattgtcatcttgcg
gaagcagaaagaacgttaaaaaagcacggaaaacataatgaacttattatattatatcaa
actaaagggcagcacagaaaagctctcgaactgttacaaaacagcgaagggggaattgaa
aggacgattgcttatctgcagcaccttggtgtagaacagatgggtttgattttagaattt
tccgattgggttcttaaagaagctgctgaagacgggttaaagatttttacagaagatttg
gcagaagtggaagctttacccaggcctcgagtgttagattatcttttacgttctcatcct
acgttagtaattccatatttagaacacgttgttcacatatggggtgataaaaatcctctt
tttcacaatgccttaatacaccaataccgcgaacaatcattaagtgacaatccttctgcg
gagattgctaaaaaaaaattgctctactttttggaaacgtcatctaattacacacccgat
atggtcttaatgcattttccgaatgatcgactattggaagaacgcgctattgttttggga
aaacttggtcgacacgaagatgcattggctatttacgttagagcgcttggcgacgtacag
aaagcgataaaatattgcgaaaatgttttcaataagaacgagaatgcaaaaaaggtttat
gtttgtcttataaaactggtattaaatccaaatgacgtaattttggatcttccgggatta
acattgtccccacttactgctcaacctgatttagaaatggctctaaagttaatggaagaa
catgcatctaagatcgatcctttatcagctttgcaaataatacctgataacgtattagca
actcgcatctttcaatttttgtcggccgcattgcataaatctctacacgtacggagaact
gttcaattgttaaagggattattatacgcccaacatctgcagggtcaggaggctcgtttg
agattacaaagtcaatgcgttgtaatcaccgatcttaatatttgcccagtctgcaagaaa
cgatttagtcatcaaagtgcattggtaagatatgctaatggaaatgtagtgcactattca
tgccatgacaagaaaatttaa
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integrated database retrieval system
