KEGG   Agrilus planipennis (emerald ash borer): 112906572
Entry
112906572         CDS       T07419                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
apln  Agrilus planipennis (emerald ash borer)
Pathway
apln03020  RNA polymerase
apln03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apln00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112906572
  09124 Replication and repair
   03420 Nucleotide excision repair
    112906572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apln03021]
    112906572
   03400 DNA repair and recombination proteins [BR:apln03400]
    112906572
Transcription machinery [BR:apln03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     112906572
DNA repair and recombination proteins [BR:apln03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112906572
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta DZR CpXC DUF4892 Zn_ribbon_3 DUF3716
Other DBs
NCBI-GeneID: 112906572
NCBI-ProteinID: XP_025836693
UniProt: A0A1W4WNM7
LinkDB
Position
Unknown
AA seq 127 aa
MSRYDSHSEGPGFVGIRFCQECNNMLYPKEDKENKILLYACRNCDYKQHADSKCIYVNKI
MHEIDELTHINPDVISDPTLPRTEDHHCPKCQHREAVFFQAQTRRAEEEMRLYYVCTNPH
CCHRWTE
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtcaaggtacgattcccatagcgaaggcccgggttttgtcggtatcagattttgtcaa
gaatgtaataacatgttgtaccctaaagaagacaaggaaaacaaaattttgttgtatgcc
tgtagaaactgtgactacaaacagcatgcagattcgaaatgtatttacgtaaataaaatt
atgcacgaaattgatgaattaactcatatcaatcccgatgttatatcagatccgacactt
cccagaactgaagatcaccactgtccaaagtgtcagcatagggaggctgtattttttcaa
gcgcaaaccaggagggctgaagaagaaatgagactttattatgtttgcactaacccacac
tgttgtcacagatggaccgaataa

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