Anaplasma platys: ANPL_01475
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Entry
ANPL_01475 CDS
T09830
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aplt
Anaplasma platys
Pathway
aplt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ANPL_01475 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplt03019
]
ANPL_01475 (rne)
03009 Ribosome biogenesis [BR:
aplt03009
]
ANPL_01475 (rne)
Enzymes [BR:
aplt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ANPL_01475 (rne)
Messenger RNA biogenesis [BR:
aplt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ANPL_01475 (rne)
Ribosome biogenesis [BR:
aplt03009
]
Prokaryotic type
rRNA processing factors
ANPL_01475 (rne)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
MOEP19
TRM
Motif
Other DBs
NCBI-ProteinID:
QJC27403
UniProt:
A0A858PXS1
LinkDB
All DBs
Position
346818..348707
Genome browser
AA seq
629 aa
AA seq
DB search
MSSGASGKRILVDAVYADEVRVAVLDEGKVVEFDQELKDRKQVRGGNVYYAVVRRIEPSL
QAVFIEYGVGKHGFLPFSEISVEHFQLPPGEKEELTQSVYGDDTDLEEIVDEDVVVPDEA
AVAGVGCSVDEKAQLATEDDRDGKRGSTAARNGKSKPVLHKMYKVQNVIKVDQKLMVQII
KEERGSKCATFSTYIVLAGRYCIFMPNSGSRNSGVSRRIEDCDNRKNLKKFISAMKLPKE
AGVIIRTAGDNKSQREIEQDLKYLQHTWKEICDACASVESPTLLYVEADIIKRTLRDFCN
ESVHDVVVAGSQAYSVVKEYAKSMFGNKLRVRMYKGSVPVFTHYRVSAQILELYSDKIYL
PSGGYLVITPTEALVSIDVNSGRMTGEDSIEETAYRTNMEAVKEIARQVNLRGLSGLIVI
DFIDMIKYRYCRAVEAEIREAFKGDRAKVQFGYISAFGLMEISRQRVKQSILETSTMQCS
HCKGVGRVRTLESISASILRDIRYLASKNAERVIAVSLNPRVLAYIFNNKRKHISDIEVE
LKVLIRLDFDESAALADFNIRTESGYTNAVTEEFVVPACGPGSPVTTIEEKVGEGADSTE
EQPQLNVEQNITDSSWVRKWLTRALEAVS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
gtgtctagtggtgctagtggaaagagaatattggttgatgcagtatatgcagatgaggtg
agggtcgccgttcttgatgaaggtaaggtagtcgaatttgatcaggaactaaaggatagg
aagcaagttcgtggtgggaatgtatattatgccgtagttaggcgtatagagccgtcactt
caggcggtgtttattgagtatggcgttggaaaacacgggttcctgccgttttccgaaata
tctgttgagcattttcagcttcctccaggggaaaaggaggagcttacccagagtgtgtac
ggtgatgatacagatcttgaagaaattgtggacgaggacgttgtcgtgcctgatgaggca
gcggttgcgggtgtggggtgttctgttgacgagaaggctcagctagctaccgaagatgat
cgtgatgggaagaggggttctacagcggctaggaatggcaagtccaagcctgttttgcac
aagatgtacaaggtgcagaacgtgattaaagtggatcaaaaactgatggtgcagatcatc
aaagaagaacgcggtagtaagtgtgctactttctcgacttacatagtcctggcgggcagg
tattgcatttttatgcccaattcaggcagtagaaacagtggggtatcgcggcgcatagag
gattgtgataacaggaagaatctgaaaaaatttatcagcgccatgaagcttcccaaagaa
gccggggtaataatacgcactgccggcgataataaatcgcagcgagaaatagaacaagat
ttgaagtacttacagcatacgtggaaagaaatatgcgatgcttgcgcttcagtggaaagt
cctactttgttatatgttgaagccgacataataaagaggacacttagggatttttgtaat
gagagtgttcatgatgtggtggtggcgggaagtcaggcgtacagcgtcgtaaaggaatat
gctaagtcgatgtttggcaataagctgcgggtcagaatgtacaagggtagcgttccggtg
ttcacacactatcgtgttagtgcgcagattctggagttgtatagcgacaagatttatctc
ccctcgggtggttatttagtgatcactccaacggaggcgctggtttctatagatgtaaac
tcaggaaggatgactggtgaagatagcatagaggagaccgcttatagaacgaatatggag
gcggtgaaggagattgctaggcaagttaacctccgtggtctttcgggccttatagtcata
gactttatagatatgatcaaatatcgctattgtcgcgcagtggaagcggaaatacgcgag
gcgttcaaaggagatcgtgccaaggtccagttcgggtacataagtgcttttggccttatg
gaaatctctaggcagcgggttaaacagagcatactcgagacaagcactatgcagtgctca
cattgtaaaggtgttggccgggttagaactctggaatcaatctcagccagcatacttagg
gacataaggtatcttgcgagtaagaatgcagagcgggtcatagctgtgtctcttaacccc
agggttttagcttatatcttcaacaacaagcgcaagcacattagtgacatagaagtggag
ctaaaggtgcttatcaggttagactttgatgaaagtgctgctcttgcggactttaacatc
agaaccgaaagcggctataccaacgctgttaccgaagaatttgttgttccagcttgtggt
ccaggatcgcctgttactactattgaggagaaagtaggagagggggctgattctacggaa
gaacagccgcagttgaatgtggagcaaaatattacagattcttcttgggtcaggaagtgg
ttaactcgagctcttgaagcggtgtcctga
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