Aurantivibrio plasticivorans: NBRC116180_18040
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Entry
NBRC116180_18040 CDS
T11902
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
aplv Aurantivibrio plasticivorans
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Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
5_3_exonuc
HHH
BRCT_2
Y4lK
zf-C2H2_ZFAND2
Motif
Other DBs
NCBI-ProteinID:
BFR60366
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Position
2037223..2039223
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AA seq
666 aa
AA seq
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MRETIDEHNYRYYVLDDPDIPDAEYDRLMRELQSIEREYPKLLTPDSPTQRVGSEPLAAF
SQVKHELPMLSLDNAFSDEELVHFNKRVCDRLKFAGDIEYACEPKLDGIAISLLYVDGVL
TQGATRGDGETGEDITQNIKTVGSIPLKLRGKGYPRLLEVRGEVYMPKESFNALNEKARS
TGQKTFVNPRNAAAGSLRQLDSSITASRRLEMCAYSVGRVEGGDLPGTHADTLRDLKGWG
FRISDQMAVVENIQQCITYYKNMESLRASLPFDIDGIVYKVNQLEQQRTLGFVARAPRWA
IARKFPAQEEMTTLLNVEFQVGRTGAITPVARLEPVFVGGVTVSNATLHNQDEIKRLDVR
IGDTVIVRRAGDVIPQVAAVVMSKRPNTTKAIVFPSLCPVCESPVETVPGEAVARCTGGL
VCEAQRKEAIRHFASRKAMDIDGLGDKLVEQLVDQGLVHSVADIYKLTTEQVAGLERMGK
KSAENLIAAIDRSKATTLARFLYSLGIREVGETTARNLAAAFGSLDKLMTANSDELQAVK
DIGPVVAHFVEEFFEQQDSREAVAALIDQGVTWSDVEVAVDGLPFDDKTFVVTGTLESMS
RDEAKERLQSLGAKVSGSVSKKTSIVVAGPGAGSKLTKAESLGIKVIDEGAFLRLLEAPE
EFVFDE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgaaacaattgatgagcacaactaccgatactacgttctagacgaccctgatatt
cccgatgctgaatacgacaggctaatgcgtgagcttcagtcgatagaaagggaatacccc
aaacttctaacacctgatagcccaacccaacgggtcggttcagaaccgctggccgcattt
tcacaggtgaagcacgagcttccgatgttatcgctcgataacgccttttcagatgaagaa
ctagtacacttcaacaagcgtgtctgcgaccgcttaaaatttgctggtgatattgaatac
gcctgtgaaccaaagctcgacggtatcgctattagcttgttatatgtcgatggtgtatta
acccaaggtgcgacacggggcgatggcgagactggcgaagatataacgcaaaatataaaa
acagtaggctcaatacccttaaaactccgtggtaagggttaccctcgattacttgaagtg
cggggcgaagtgtacatgccaaaagaaagctttaacgctttaaatgaaaaagcacgaagt
accgggcaaaaaacatttgttaatcctcgaaacgccgcagcggggagtttacgtcagctt
gattcatcaataacggcaagccgccgtttagaaatgtgtgcctatagcgtcggtagggtg
gagggcggagatctacctggcacgcacgcggacacactcagagatttaaagggttggggt
tttagaattagcgatcaaatggctgttgttgaaaatattcaacagtgcataacctactac
aagaacatggaatcgcttcgagccagcctaccatttgatatcgatggtatcgtctataaa
gttaatcagttggagcagcagcgaacactaggttttgttgcgagagcgccacgatgggca
attgcgcgaaaatttcccgcacaagaggaaatgaccactttgttgaatgtagagtttcaa
gtagggcgaaccggagcaataacacccgtcgctcgattggaaccggtgttcgttggtggc
gttacggtatcgaatgcaacgttacataatcaagatgaaattaaacgtttggatgtgcgc
attggcgataccgtaattgttcggcgagcaggtgacgttataccgcaagttgcggctgtt
gttatgtcgaagcgtcctaacacaacaaaagctatcgtgtttcctagcctgtgtccggta
tgcgaatcaccagttgaaacagttcctggtgaagccgtcgctcgctgtactggcggctta
gtttgcgaagctcagcgaaaagaagccattcgccatttcgcgtcacggaaagcgatggat
attgatggtctaggagataagttagttgagcagcttgtcgatcaaggtttggttcattct
gtagcagatatttataagctgacgacagagcaggtggctggccttgaacggatggggaaa
aagtcagcagagaatttaattgctgcaatcgatcgcagcaaagcgacaaccctagctcgg
tttttgtactcccttggcattcgtgaagttggcgaaactacagcgcgcaacctcgcggct
gcttttggtagcctggataaactgatgacagcgaacagtgacgagttgcaggcggttaag
gatattgggcctgtcgttgcacattttgttgaagaattttttgagcagcaagatagtcga
gaagctgtcgcagcgttgatagatcaaggtgtgacatggtcggatgttgaggtggcggtt
gatggtttaccctttgatgataaaacgtttgtggtgacgggtacgttagaatctatgtcg
cgcgacgaagcgaaagaaagactacaatcccttggtgccaaagtgtctggtagtgtatct
aaaaagaccagtattgttgttgctgggccaggtgctggatccaaattaacgaaggcagaa
tctctaggtattaaggtaattgatgagggcgcgtttctgcgcttactcgaggcccccgaa
gagtttgtctttgatgaataa
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