Aurantivibrio plasticivorans: NBRC116180_34020
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Entry
NBRC116180_34020 CDS
T11902
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
Organism
aplv Aurantivibrio plasticivorans
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Paralog
GFIT
Motif
Pfam:
TraG-D_C
TrwB_AAD_bind
DUF87
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BFR61964
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Position
complement(3844983..3847124)
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AA seq
713 aa
AA seq
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MSAHPMEALLRPPVELWSTCTAFAAGTLAWLAPGALMMPPGIAVATGMTFFGFGLWRGRQ
AWRVLRYQRHMRRLPLYQLRAEQIPVSHHKLFLGRGFRWTQQHTQRLRDTLKPDVQRYVQ
PGALYQWARQKEVAWEAIPLLTVLARGLRSRSRWNPLAPLPAVGGKPALHAVEPHEQSVW
MDLGERVGHTLVLGTTRVGKTRLAELLITQDIRRGDVVIVFDPKGDADLLRRIYAEARRA
GRLDDFYLFHLGYPELSARYNAIGNFSRITEVATRIANQLPNEGNSAAFKEFAWRFVNII
ARALVALKRRPDYQQVRRYINDIEPLFVEYAGHCADVAGIENWATLVEECAADIKERNLP
HALRGRSMEAIACMRLLQEKAIYDPVLDGLISAFKYDKTYFDKIVSSVGPLMEKLTTGTI
AGLISPDYQDEQDARPIFEWMEVVRRKGIVYVGLDALTDTTVASAVGNSMFADLVSVAGQ
IYKHGVDPGQDHDQRQENRDTAKRPLTPTISLHADEFNELIGDEFVPLLNKAGGAGFQVT
AYTQTWSDVEARLGNRAKAGQVAGNFNTMLMLRVKELDTAAMLTDQLPRVEVFTLMSVSG
VDDSSDPGSGVDFKSRNEDRISVSEVPMLTAADMVTLPKGQAFALLEGGQLWKIRIPLPD
DREDAAMPDNFEAIADAMRRSYVTNDHWYRVTDHWWHAVTEAASLAPDASEQP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcatccgatggaggcattgctgcgacctccggtggagttgtggtccacctgc
acggcgtttgccgctggcacattagcctggttagcccccggggcgttgatgatgccgccg
gggattgcggtggccaccggtatgactttctttggttttggactgtggcgtggccggcag
gcctggcgtgtgctgcgctatcagcgtcacatgcggcgcttgcccctctaccaattgcgg
gccgaacagataccggtcagtcatcacaagttatttctggggcggggtttccgctggacc
cagcaacacactcaacgcctgcgcgatacgctgaaaccggacgtgcagcgttacgtgcaa
cccggcgctctctaccaatgggcccggcagaaagaggtcgcctgggaagccatcccacta
ctaactgtgttagccaggggcctacgcagtcgcagccgctggaatccgctggcaccgttg
ccggcagtcggtggcaagcccgccctgcatgcggtggagccccatgagcaatcggtgtgg
atggatcttggtgaacgggtagggcacaccctggttttgggcactacgcgggtgggcaaa
acccgtctggccgaactgctgattactcaggatatccgccgcggtgacgtggttatcgtg
ttcgaccccaaaggggatgccgacctgttgcggcgcatctacgcggaggccaggcgcgct
ggccgcctggatgatttttacctctttcatctcgggtatccggagctgtcggcgcgctat
aacgcgatcgggaatttttcccgcatcaccgaagtggccacccgcatcgccaatcagttg
cccaatgaaggcaactcagcggccttcaaggagtttgcctggcgctttgtcaacatcatt
gcgcgcgccctggtggccctaaaacgccgcccggattatcagcaggtgcgcagatacatt
aacgacatcgaacccctgttcgtggaatatgcgggccactgcgccgatgtcgccggtatc
gaaaactgggcaacgctggtggaagagtgcgccgcagacattaaggagcgcaatctgccc
catgcgctgcgtggtcgttccatggaggcgattgcctgtatgcgcctactgcaggagaag
gccatttacgatcccgtgttggacgggctgatttccgccttcaaatacgacaagacctat
ttcgacaagatcgtcagctcggtgggcccactgatggaaaagctgaccaccggcaccatc
gcagggctcatctcgccggattatcaggacgagcaggatgcgcggccgatcttcgagtgg
atggaggtggtgcgtcgcaaaggtattgtctatgtggggctcgatgccctgaccgacacc
accgtggccagcgccgtcggcaattccatgtttgcggacctggtctcggtggctggccag
atctacaagcatggcgtggatcccggccaggaccatgaccaaagacaggaaaacagggac
accgccaaacggcccttaaccccgaccatttctctgcacgccgatgagttcaacgagctg
attggagatgaattcgtgccgctgctgaacaaagcggggggcgccggatttcaggtgacg
gcctacacccagacctggtccgacgtcgaggcgcgtttgggcaaccgggcgaaagccggg
caggtggcgggtaacttcaatacgatgttgatgttgcgggtgaaagagctggataccgca
gccatgctgaccgatcagttaccgcgggtggaggtcttcaccttaatgagtgtatccggg
gtggatgactcctcggatcccggctccggggtcgacttcaaatcccgcaacgaagaccgg
atcagcgtttcggaagtgccgatgttaacggccgccgatatggtcacgctgcccaaaggg
caggcgttcgccctgctggagggcggccagctctggaaaatccgcatcccgttgccggac
gatcgagaggatgccgctatgccggataactttgaggcgatagccgacgccatgcggcgc
agctatgtcaccaacgatcactggtaccgggttactgatcactggtggcatgccgtcacc
gaggcggcaagccttgcgccagatgccagtgagcagccctga
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