Alpha proteobacterium HIMB5: HIMB5_00000130
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Entry
HIMB5_00000130 CDS
T02250
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm00020
Citrate cycle (TCA cycle)
apm00190
Oxidative phosphorylation
apm00650
Butanoate metabolism
apm00720
Other carbon fixation pathways
apm01100
Metabolic pathways
apm01110
Biosynthesis of secondary metabolites
apm01120
Microbial metabolism in diverse environments
apm01200
Carbon metabolism
Module
apm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
apm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
apm_M00149
Succinate dehydrogenase, prokaryotes
apm_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HIMB5_00000130
00650 Butanoate metabolism
HIMB5_00000130
09102 Energy metabolism
00190 Oxidative phosphorylation
HIMB5_00000130
00720 Other carbon fixation pathways
HIMB5_00000130
Enzymes [BR:
apm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HIMB5_00000130
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
Pyr_redox_2
FAD_oxidored
GIDA
HI0933_like
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AFS46786
LinkDB
All DBs
Position
11406..13181
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AA seq
591 aa
AA seq
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MSSYEIIDHQYDVVVLGAGGSGLRAAVGLSEAGLKTACISKVFPTRSHTSAAQGGISAAL
GNMGEDDWRWHMYDTVKGADWLGDQDSIEYLCKEAPKAVIELEKYGVPFSRTEDGKIYQR
PFGGMTKNYGNGIVQRTCAAADRTGHAILHTLYGQALKHKTEFFIEYFALDLLMKDGQCK
GLIAWNLNDGTIHRFRAHTVIIATGGYGKVYYSATSAHTCTGDGNAMVLRAGLPLQDMEF
VQFHPTGIYGHGTLITEGARGEGGYLTNSKGERFMERYAPKAKDLASRDVVSRSMSIEIN
EGRGVGKDQDHVHLNLSHLDKDIIESRLPGITDAARLFADVDVTKEPIPVVPTVHYNMGG
IPTNYKGEVLTVNGSEKTVPGLMAIGEAACVSVHGANRLGSNSLIDLVVFGRAAAKRAAE
IVKPGAPHDEIPESETQKCLDRFDKLRNADGDTGTAELRLAMQKTMQSKCAVFRTEKNLK
EGVDEIRKTYDGLGSISVKDKSLVFNTDLVETLEFDNLIRQAVTTVDSAYNRKESRGAHA
REDYPKRDDEKFMQHTLIWCDGKDTKITYRPVHKTTLTNEVQYFPPQERVY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatacgaaattatagatcatcaatatgatgtagttgttttaggagctggaggc
tcaggcttgagagctgcagtaggtctaagcgaggcaggccttaaaactgcatgtatttca
aaagtgtttccaacaagaagtcatacttcagcagcgcaagggggtatttctgctgcacta
ggaaatatgggtgaagatgactggagatggcacatgtatgatactgtaaaaggtgctgat
tggttaggtgatcaagatagtattgaatatttatgtaaagaggccccaaaagctgtgatt
gagttagaaaagtatggagtaccgtttagtagaacagaggacggtaagatctatcaaaga
ccatttggtggaatgacaaaaaattatggtaatggaattgtacaaagaacatgtgcggct
gctgatagaacaggacacgcaattttacacacactatatggacaagcacttaaacataaa
actgaattttttattgaatattttgcattagatctattgatgaaagatgggcaatgcaaa
ggacttattgcatggaacttaaatgacggaactattcatagatttagagctcatacagta
attattgcaacaggtggatatggaaaagtttattattctgcaacatcagctcacacatgt
acaggtgatggaaatgcaatggtattaagagcaggtctaccacttcaagatatggagttt
gtacaatttcatccaacaggaatttatgggcatggaacactaataacagaaggtgcaaga
ggtgaaggtggttatcttacaaattctaaaggtgaaagatttatggagcgatatgctcct
aaagcaaaagatcttgcctcaagagatgttgtaagtagatcaatgtctatcgaaattaac
gagggaagaggtgttggtaaagatcaagatcatgttcacttaaatttaagtcatttagat
aaagatattatagaaagtagactgccaggaattactgatgctgcaagactatttgcagat
gttgatgtaactaaggaaccaatcccagtagtaccaacagttcattataacatgggtgga
ataccaacaaactacaagggtgaagtattaactgttaatggttcagaaaaaacagttcca
ggcttgatggcaattggtgaagccgcatgtgtttcagttcatggtgctaacagattaggg
tcaaactctttaattgatttggttgtttttggaagagcagcagcaaagagagcagctgaa
atagttaagccaggcgcacctcatgatgaaattccagagtcagaaacacaaaagtgttta
gatagatttgataagttaagaaatgcagatggagatacaggtactgcagaactaagattg
gcaatgcaaaaaacaatgcagtctaaatgtgcagtatttagaactgaaaagaatttaaaa
gagggtgttgatgaaataagaaaaacttatgatggcttgggatctatctcagtaaaagat
aaatcattagtatttaatacagatttagttgaaacacttgagtttgataatttaattaga
caagcggtcacaacagttgactcagcctataatagaaaagagagcagaggtgctcatgca
agagaagattaccctaaaagggatgacgaaaaatttatgcagcacacactgatttggtgt
gatggtaaagatacaaaaattacatatagaccagttcataaaacaactttaacaaatgaa
gtacaatattttccaccacaggaaagagtgtattaa
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