Alpha proteobacterium HIMB5: HIMB5_00000230
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Entry
HIMB5_00000230 CDS
T02250
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HIMB5_00000230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apm03400
]
HIMB5_00000230
Enzymes [BR:
apm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HIMB5_00000230
DNA repair and recombination proteins [BR:
apm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HIMB5_00000230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
Helicase_C
ResIII
Zn_ribbon_PriA
PBDC1
AAA_30
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AFS46796
UniProt:
J9YV09
LinkDB
All DBs
Position
24794..26749
Genome browser
AA seq
651 aa
AA seq
DB search
MKFPILLPNIFNHPFTYESDIKLDIGDYVEVPFGKSKMTGIVWNEFEKKSNKNFKVKKII
KKLNLPKLNKNFIQFLNSFSDYNLIPKGMSLKLLLLSSNAIEKGDLKKLEEFKKLQNPLN
FELNNEQHKSLKEMNKLNDRFRVHVLQGTTGSGKTIVYFYALKEILSNNNQGLILLPEIG
LTNQFEKKFYEFFGFKPAIWHSGISKKKKEIIWNGIATGKIKVVIGARSSMFLPFKNLKM
IVIDEEHDQSFKQDEGVIYHARDMAILRASYENIPVNLVTAVPSVETFENIKKQKYSVSK
LKKRYKDASLPKYEIINLNNTKLEKQSWLSNEIINRVNEHLDKKDQILFFLNRRGFSPNV
ICKKCFKKFECPYCSINLVYHKSSNNLLCHYCGHKTSLNRDCNEDGKCDYYFSGPGVERI
YEEVKKKFPKRSIEIFSSDTMNKKSSKEKLEKIIDNKIEILIGTQLISKGFHFPSLNCIV
VVDIDFSTQGHDLRGAEKNLQLYHQLSGRAGRTGNPATVYFQTYNKNIKMVSDLTNENPE
IFLEKEIQIRKTNNLPPFQRFISLILSGKDQTKLKKESFKLKESLQNKISGKILGPVNAP
IYKIQGKFRIRYLIRGSKTIKLQNSLSEIISKYKFPAGIKLSVDVDPITFN
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttccaattcttttacctaatattttcaatcatccatttacttatgaaagtgat
attaaattagatattggagattatgtagaggttccatttggtaagtcaaaaatgacaggt
attgtttggaatgaatttgaaaaaaagagtaacaaaaattttaaagtaaaaaagattatt
aaaaaattaaatttaccaaaattaaataaaaattttattcagtttttgaatagtttttct
gactataatttaattccaaaagggatgtcattaaaattactattattgagcagcaacgct
atagaaaaaggagaccttaaaaaacttgaagaatttaaaaagttacaaaatccattaaat
tttgaattaaataatgaacaacataaatcactcaaagaaatgaataaattaaatgataga
tttagagttcatgtgttacagggaacaacagggtctggaaaaactattgtttatttttat
gcattaaaagaaattttatcaaataataatcaaggcttaatattgttaccagaaattgga
ttaaccaatcaatttgaaaaaaaattttatgaattttttggttttaaaccagctatctgg
cattcaggaatttcaaagaaaaaaaaagaaataatttggaatggtattgcaacaggaaag
attaaagttgttattggtgcaaggtcatcaatgtttttgccttttaaaaatttaaagatg
attgttattgatgaggaacatgatcaatcatttaaacaagatgaaggagttatttatcat
gcaagagatatggcaatattaagagcttcttatgaaaatattcctgtcaacttagttaca
gcagtaccttcagttgaaacttttgaaaatataaaaaaacaaaaatattcggtttcaaaa
ttaaaaaaaagatacaaagatgcttctttaccaaaatatgaaataattaatttaaataat
acaaaattagaaaaacaatcatggttatcaaatgaaattataaatagagtaaatgaacat
ttagataagaaagatcaaattttattcttcttaaatcgtaggggattttcacctaacgta
atatgtaaaaaatgttttaaaaaatttgaatgcccttattgttcgattaatttagtttat
cataaatcatcaaataatcttttatgtcattactgtggccacaaaacatctctaaatagg
gattgcaatgaagatggaaaatgcgattattattttagtggacctggggttgaaagaatc
tacgaagaagttaagaaaaagtttccaaaaagatctattgagattttctcaagcgataca
atgaataaaaaaagttctaaagaaaaattagaaaaaattattgataataaaattgaaatt
ttaattggcacacagcttatttcaaaaggttttcatttcccaagtctcaattgtatagtt
gtagtcgatattgatttttcaacacaaggacatgatttgagaggtgctgaaaagaattta
caattatatcatcaactttctgggagagctggtcgaactggtaatcctgcaactgtatat
ttccaaacttataataaaaatattaagatggtttcagatttaacaaatgaaaatccagaa
atttttttagaaaaagaaattcaaattagaaaaacaaataacttacccccatttcaaaga
tttatttctctaatattatctgggaaagatcagacaaaattaaaaaaagagtcttttaaa
ttaaaagaatctcttcaaaataaaatttcaggaaaaatattaggtcctgtgaatgctcct
atctataaaatccaagggaaatttaggataagatatttaattagaggatcaaaaactata
aaattgcaaaattcattatcagaaataatctcaaaatataagtttccagctggaataaaa
ctttcagttgatgttgatccgattaccttcaattaa
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