Alpha proteobacterium HIMB5: HIMB5_00000920
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Entry
HIMB5_00000920 CDS
T02250
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HIMB5_00000920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apm03019
]
HIMB5_00000920
03110 Chaperones and folding catalysts [BR:
apm03110
]
HIMB5_00000920
03029 Mitochondrial biogenesis [BR:
apm03029
]
HIMB5_00000920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apm04147
]
HIMB5_00000920
Enzymes [BR:
apm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HIMB5_00000920
Messenger RNA biogenesis [BR:
apm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HIMB5_00000920
Chaperones and folding catalysts [BR:
apm03110
]
Heat shock proteins
HSP60 / Chaperonin
HIMB5_00000920
Mitochondrial biogenesis [BR:
apm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HIMB5_00000920
Exosome [BR:
apm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HIMB5_00000920
Exosomal proteins of other body fluids (saliva and urine)
HIMB5_00000920
Exosomal proteins of breast cancer cells
HIMB5_00000920
Exosomal proteins of colorectal cancer cells
HIMB5_00000920
Exosomal proteins of bladder cancer cells
HIMB5_00000920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
AFS46865
UniProt:
J9YUY2
LinkDB
All DBs
Position
complement(91900..93564)
Genome browser
AA seq
554 aa
AA seq
DB search
MAKVVKFDAEARAAMIRGVNILADTVKVTLGPKGRNVVMDKSYGAPRITKDGVSVAKEID
LEDKFENMGAQMVKEVASKTNDEAGDGTTTATILAQAIVKEGVKYVTAGMNPMDVKRGID
AAVETVKENLVASAKKVKDSDEIAQVGTISANGDKEIGTMIAKAMQKVGNEGVITVEENK
GIETELDVVEGMQFDRGYLSPYFITNSDKMTTELDNPFILLHEKKLTNLQPMVPLLEAVV
QAGRPLMIISEDVEGEALATLVVNKLRGGLKVVAVKAPGFGDRRKAMLEDIAILTGGSVI
SEDLGIKLENVKLDDLGSCKKVKVDKDNSTIVNGAGKKSDIEARCGSIKQQIDETTSDYD
KEKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVEDALNATRAAVEEGIVTGGGCALLY
ASRDLSKVKVKGDDQKAGVDLVKKALEAPIRQITKNAGVDGSVVVGKLLEQNKKTHGYDA
QSEEYCDMFAKGIIDPVKVVRTALQDAASISGLLVTTEAMIADKPEEKDAGAAGGMPGGM
GGMGGMGGMGGMGM
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagttgttaaatttgatgctgaagcaagagcagcaatgataagaggtgtaaat
atcttggccgacactgttaaagtaactttaggaccaaaaggaagaaatgttgttatggat
aaatcttatggtgctccaagaattactaaagatggtgtttcagttgctaaagaaattgac
ctagaagataaatttgaaaacatgggtgcacagatggtaaaggaagttgctagcaaaaca
aatgatgaagctggtgatggtacaactactgcaactattcttgcacaagcaattgttaaa
gaaggtgtaaaatatgttacagcaggaatgaaccctatggatgtaaaaagaggtatagat
gctgctgttgaaacagttaaagaaaacttagttgcttctgcaaaaaaagttaaagatagt
gatgagatagctcaagttggaacaatttcagcaaacggcgataaagaaattggaacaatg
attgcaaaagcaatgcaaaaagttggtaatgagggtgttatcactgttgaagaaaacaaa
ggtatagagacagagcttgatgtagttgaaggtatgcaatttgatagaggttatctatct
ccatactttattacaaacagtgataaaatgactacagagctagataatccatttattctt
ttacatgagaagaaattaacaaatctacaaccaatggttccacttttagaagctgttgtg
caagctgggagaccattaatgattatttctgaagatgttgaaggtgaagctttggcaact
ttagttgttaacaaattaagaggtggtttaaaagttgtagcagttaaagctccaggattt
ggtgatagaagaaaagcaatgttagaagatattgctatcctaactggtggatctgttatt
tctgaagatttagggattaaacttgaaaatgttaagttagatgatcttggttcatgtaaa
aaagttaaagttgataaagacaacagtacaattgtaaatggtgctggtaaaaaatctgac
attgaagcaaggtgtggttcgatcaaacaacaaattgatgaaacaacatctgattatgat
aaagaaaaacttcaagagagacttgctaaattagctggtggtgttgcagttatcaaagtt
ggtggtgcaacagaagttgaagttaaagagagaaaagacagagttgaagatgcattaaat
gcaactagagctgctgttgaagaaggtatcgtgactggtggtggatgtgctttgttatat
gcatcaagagatcttagcaaagttaaggttaaaggtgatgaccaaaaagctggtgtagat
cttgttaaaaaagcacttgaagcacctattagacaaattactaaaaatgctggagtagat
ggttcagttgtagttggtaaattgttagagcaaaataaaaaaactcatggttatgatgct
caaagtgaagagtattgtgatatgtttgcaaaaggtatcattgatcctgtgaaagttgtt
agaactgctttacaagatgcagcttctatttcaggattattagtaactactgaagcaatg
attgcagacaaacctgaagaaaaagatgctggtgcagctggtggaatgcctggaggaatg
ggcggcatgggtggaatgggtggaatgggtggaatgggaatgtaa
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