Alpha proteobacterium HIMB5: HIMB5_00002020
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Entry
HIMB5_00002020 CDS
T02250
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm00470
D-Amino acid metabolism
apm00550
Peptidoglycan biosynthesis
apm01100
Metabolic pathways
apm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HIMB5_00002020
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HIMB5_00002020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HIMB5_00002020
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
apm01011
]
HIMB5_00002020
Enzymes [BR:
apm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HIMB5_00002020
Peptidoglycan biosynthesis and degradation proteins [BR:
apm01011
]
Precursor biosynthesis
Amino acid ligase
HIMB5_00002020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
RimK
GARS_A
ATP-grasp_3
ATP-grasp
ATP-grasp_4
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AFS46971
UniProt:
J9YVG8
LinkDB
All DBs
Position
192206..193117
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AA seq
303 aa
AA seq
DB search
MKKKILILSGGISKERSISLDTGNQVAKELKKKYSVKICEPNNDLEKNIKKFKPHKIFNA
LHGQFGEDGYIQTIIENYKIPYTHSGVIASAIAMDKDISKRIFLKNKILTPKYINFTFDK
NPKELTKTVEKILKFPVVVKPINEGSSVNVFICTKKNFLKKVELLKSYKKIMIEEFIGGR
EIQVAILGKKKLGAIELKPKRKFYDYTAKYKKSAKTKHIIPVQLPKKKLDLVLNISLKAH
NLIGCKGVTRSDFKFYNNKFYLLEINTQPGMTKLSLVPEIAAYRGISFFDLLEWMLKDAS
INR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaaaaattttaatactttcaggaggaatttcaaaagagagatctattagttta
gatacaggtaatcaagtagcaaaagaattaaagaaaaaatattcagttaaaatttgtgaa
cccaataacgatttagaaaaaaatataaaaaaatttaaaccacataaaatttttaacgcc
ttacatggtcaatttggagaagatggctatatacaaactataattgagaattataaaatt
ccatatacccactctggtgtcatagcttcagctattgctatggataaagatatttcaaaa
agaatttttctaaaaaataaaatcttaacgccaaaatatattaattttacatttgataaa
aatccaaaagaattaactaaaactgtagaaaaaattcttaagtttccagttgtggttaaa
cctataaatgaaggttctagtgtaaatgtatttatttgtacaaaaaagaactttttgaaa
aaagttgaattattaaaatcatataaaaagattatgatagaagaatttattggaggaaga
gaaattcaagttgcgatattaggtaaaaaaaaattaggtgcaattgaattaaaaccaaaa
agaaaattttatgattacacagcaaaatataaaaaaagtgcaaaaacaaaacatataatc
ccagttcaactacccaaaaaaaaactagatctggttttaaatatttctcttaaagctcat
aacttgattggttgtaagggagttacaagatctgattttaaattttataataataaattt
tatcttctagaaattaatacccaacctggaatgacaaaattatctttagttccagaaata
gccgcatatcgtggtattagtttttttgatttacttgagtggatgttaaaagatgcctca
atcaacagataa
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