Alpha proteobacterium HIMB5: HIMB5_00003050
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Entry
HIMB5_00003050 CDS
T02250
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
apm
Alpha proteobacterium HIMB5
Pathway
apm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
apm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HIMB5_00003050
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
apm01007
]
HIMB5_00003050
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apm03016
]
HIMB5_00003050
03029 Mitochondrial biogenesis [BR:
apm03029
]
HIMB5_00003050
Enzymes [BR:
apm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HIMB5_00003050
Amino acid related enzymes [BR:
apm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HIMB5_00003050
Transfer RNA biogenesis [BR:
apm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HIMB5_00003050
Prokaryotic type
Other AARSs
HIMB5_00003050
Mitochondrial biogenesis [BR:
apm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HIMB5_00003050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA_anti-like
Adeno_terminal
Motif
Other DBs
NCBI-ProteinID:
AFS47074
LinkDB
All DBs
Position
294471..296255
Genome browser
AA seq
594 aa
AA seq
DB search
MNKYRTHTCNELSKKEVGSDIKISGWINKKRDHGNLLFIDLRDNYGITQCIINQENKNFK
EIEKLQLETVIKIEGKVLKRTEETINKDIQTGEIEVSINNFEILGTCKELPMPVFSDQEY
AEEIRLKYRFLDLRRKKIHENILLRSKIISFIREQMNKFGFLEFQTPILTSSSPEGARDF
LVPSRLNPGKFYALPQAPQQFKQLIMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDLE
MSFVEQEDVFKVVEELLINTFKKFSDKKMMFKKFPRISYEESMLKYGSDKPDLRNPLVIN
DITEIFSRDDVSFDIFKKLVKNGSLVRCIVTKNTKDKPRSFFDGIDKWAKGQGWAGLAYF
TIEKDKEITAKGPVGKFFKEDALIELMKLSNAEVGDSIFFACNKKNEIEKITSSARDKIA
NELNLIDENIFAFCWIVDYPMFELDENDGKIGFSHNPFSMPQGDLEKLNFEKPLEMKAYQ
YDIVCNGIELSSGAIRNHKPELMYKLFSIAGYNKEQVDEKFSGMINALSYGAPPHGGIAP
GIDRIVMLLANEKNIREVTMFPMNQNAQDLMMNAPSEISENQLKELNLTLKKRN
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaatatagaacacatacatgtaacgagcttagtaaaaaagaagttggttctgat
ataaagatatctggttggattaataagaaaagagatcatggaaacttattgtttatagat
cttagagacaattatggaatcacccaatgtataattaatcaagaaaataaaaattttaaa
gagattgaaaaacttcagttagaaactgttatcaaaattgaaggtaaagttttgaaaaga
acagaagaaacaataaataaagacatacaaactggtgaaattgaagtttctattaataat
tttgaaattttagggacatgtaaagaattaccaatgccagtctttagtgatcaagaatat
gctgaagaaattagattaaaatatagatttttagatttaagaagaaaaaaaatacatgaa
aatattttattaagatcaaaaataatttcatttattagagagcaaatgaacaagtttggt
tttttagagtttcaaacaccaatcttaacatcttctagtccagaaggagcgagagatttc
ttagttccaagtagattaaatccaggtaagttttacgctttacctcaagcaccacaacaa
tttaaacaattaataatggtatctggatttgatagatattttcaaattgcaccttgtttt
agagatgaagatgctagagctgatagaagtcctggagaattttatcagttagatcttgaa
atgtcgtttgttgaacaagaagatgtatttaaagttgtagaagaacttttaataaataca
tttaaaaagttttcagataaaaaaatgatgtttaaaaaatttcccagaatttcttatgag
gaatcaatgttaaaatatggatcagataaacctgacttaagaaatcctcttgtcattaat
gatatcacagaaattttctcaagagatgatgtttctttcgatatattcaagaaattagta
aaaaatggttctttagttagatgtattgtcacaaagaatacaaaagataaaccaagaagt
ttttttgatggcatagacaaatgggccaaaggtcaaggttgggctggtttagcttatttt
acaatagaaaaagacaaagaaattactgctaagggacctgttggaaagttctttaaagaa
gatgccttgattgaattaatgaaattatctaatgctgaagtaggagatagtatatttttt
gcttgtaataaaaaaaatgaaattgaaaaaataacttcttcagcaagagataaaattgca
aatgaattaaatttaattgatgaaaatatttttgctttttgttggatagttgattatcca
atgttcgaattagatgagaatgatggaaaaataggatttagtcacaatccattttcaatg
cctcaaggagatttagaaaagttaaattttgaaaaacctttagagatgaaagcttatcag
tatgatatagtttgtaatggtattgaattatcatctggagcaattagaaaccataaacct
gaattaatgtataaacttttttcaattgcaggatacaataaagaacaggttgatgaaaaa
tttagtggtatgattaatgcgctcagttatggcgcaccgcctcatgggggaattgcgccg
gggatagatagaattgtaatgttattagcaaacgaaaaaaatataagagaagtcacaatg
tttccaatgaaccaaaatgctcaagacctaatgatgaacgctccatcagagataagtgaa
aatcaacttaaagagctaaatctaacactaaaaaaaagaaattaa
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